Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- mitochondrion 6
- plastid 1
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Zm00001d005757_P001 | |
| Zm00001d020460_P001 | |
| Zm00001d032175_P001 | |
| Zm00001d050443_P001 |
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KXG35630 | Sorghum | nucleus | 83.78 | 84.55 |
| TraesCS5D01G234700.1 | Wheat | mitochondrion | 67.57 | 80.65 |
| TraesCS5A01G227200.1 | Wheat | mitochondrion | 67.57 | 80.65 |
| TraesCS5B01G226000.1 | Wheat | mitochondrion | 66.67 | 79.57 |
| GSMUA_Achr6P30650_001 | Banana | mitochondrion | 47.75 | 55.79 |
| KRH03476 | Soybean | cytosol | 36.04 | 50.63 |
| KRH56913 | Soybean | cytosol | 36.04 | 50.63 |
| Zm00001d032177_P001 | Maize | mitochondrion | 51.35 | 47.9 |
| Zm00001d052395_P001 | Maize | plastid | 36.94 | 47.67 |
| KRH18477 | Soybean | cytosol, mitochondrion | 35.14 | 47.56 |
| GSMUA_AchrUn_... | Banana | cytosol | 37.84 | 45.16 |
| KRH54551 | Soybean | cytosol, mitochondrion | 36.04 | 44.94 |
| KRH63346 | Soybean | cytosol, mitochondrion | 36.04 | 44.94 |
| Zm00001d023286_P001 | Maize | cytosol | 39.64 | 44.9 |
| Zm00001d023289_P001 | Maize | cytosol | 39.64 | 44.9 |
| AT3G28917.1 | Thale cress | mitochondrion | 39.64 | 44.0 |
| Zm00001d050452_P001 | Maize | mitochondrion | 49.55 | 43.31 |
| KRG93529 | Soybean | cytosol, mitochondrion | 37.84 | 43.3 |
| AT1G18835.1 | Thale cress | mitochondrion | 34.23 | 43.18 |
| Zm00001d044662_P001 | Maize | cytosol, plastid | 38.74 | 43.0 |
| AT1G74660.1 | Thale cress | mitochondrion | 36.94 | 40.2 |
| VIT_08s0056g01130.t01 | Wine grape | nucleus | 36.04 | 29.63 |
| CDY46298 | Canola | cytosol | 15.32 | 20.24 |
| Bra039615.1-P | Field mustard | cytosol | 31.53 | 19.34 |
| Zm00001d020774_P001 | Maize | nucleus | 32.43 | 13.19 |
| Zm00001d009674_P001 | Maize | nucleus | 27.93 | 12.97 |
| Zm00001d005931_P001 | Maize | nucleus | 33.33 | 12.94 |
| Zm00001d031840_P001 | Maize | nucleus | 32.43 | 11.69 |
| Zm00001d003645_P001 | Maize | nucleus | 30.63 | 11.33 |
| Zm00001d033791_P001 | Maize | cytosol, mitochondrion, nucleus | 23.42 | 11.26 |
| Zm00001d013409_P001 | Maize | cytosol, mitochondrion, nucleus | 23.42 | 10.83 |
| Zm00001d041780_P001 | Maize | nucleus | 32.43 | 10.32 |
| Zm00001d005757_P001 | Maize | nucleus | 29.73 | 9.14 |
| PGSC0003DMT400044269 | Potato | nucleus | 34.23 | 9.07 |
| Zm00001d020460_P001 | Maize | nucleus | 29.73 | 8.92 |
| Zm00001d049000_P001 | Maize | plastid | 33.33 | 8.81 |
| Zm00001d050443_P001 | Maize | nucleus | 27.93 | 8.47 |
| Zm00001d032175_P001 | Maize | cytosol | 27.93 | 8.31 |
| Zm00001d017784_P001 | Maize | nucleus | 30.63 | 8.15 |
| Zm00001d051573_P001 | Maize | nucleus | 29.73 | 7.4 |
| Solyc09g089550.2.1 | Tomato | nucleus | 36.94 | 5.09 |
| PGSC0003DMT400044270 | Potato | cytosol | 36.94 | 5.06 |
Protein Annotations
| EnsemblPlants:Zm00001d020459_P001 | EnsemblPlants:Zm00001d020459_T001 | EnsemblPlantsGene:Zm00001d020459 | InterPro:IPR006456 | InterPro:ZF_HD_homeobox_Cys/His_dimer | PANTHER:PTHR31948 |
| PANTHER:PTHR31948:SF27 | PFAM:PD125774 | PFAM:PF04770 | PFscan:PS51523 | ProteinID:ONM54963.1 | TIGRFAMs:TIGR01566 |
| UniParc:UPI00084469CA | UniProt:A0A1D6I496 | MapMan:15.5.3.13 | : | : | : |
Description
ZF-HD-transcription factor 13Mini zinc finger 3
Coordinates
chr7:+:115920523..115920858
Molecular Weight (calculated)
12390.8 Da
IEP (calculated)
8.823
GRAVY (calculated)
-0.455
Length
111 amino acids
Sequence
(BLAST)
(BLAST)
001: MAYKYRVMQR ASSCAERGRK LTMKRLLILQ RCEPIVRFSC CSVRYGDCRR NHAASTGGHA VDGCREFIAE GEEGTSGALK CAACGCHRSF HRRVQVYEVA
101: WGYGSDTSST E
101: WGYGSDTSST E
1: MRKRQVVLRR ASPEEPSRSS STASSLTVRT VRYGECQKNH AAAVGGYAVD GCREFMASRG EEGTVAALTC AACGCHRSFH RREIETEVVC DCNSPPSTGN
Arabidopsis Description
MIF2Mini zinc finger protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9LJW5]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.