Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400044269 | Potato | nucleus | 51.73 | 100.0 |
| Solyc09g089550.2.1 | Tomato | nucleus | 91.98 | 92.55 |
| PGSC0003DMT400050286 | Potato | mitochondrion | 4.69 | 45.78 |
| TraesCS5D01G234700.1 | Wheat | mitochondrion | 5.19 | 45.16 |
| TraesCS5A01G227200.1 | Wheat | mitochondrion | 5.19 | 45.16 |
| Os08t0438100-01 | Rice | cytosol | 5.06 | 44.09 |
| TraesCS5B01G226000.1 | Wheat | mitochondrion | 5.06 | 44.09 |
| GSMUA_AchrUn_... | Banana | cytosol | 4.94 | 43.01 |
| GSMUA_Achr6P30650_001 | Banana | mitochondrion | 4.81 | 41.05 |
| Zm00001d020459_P001 | Maize | mitochondrion | 5.06 | 36.94 |
| Zm00001d032177_P001 | Maize | mitochondrion | 5.31 | 36.13 |
| KXG35630 | Sorghum | nucleus | 4.81 | 35.45 |
| Zm00001d050452_P001 | Maize | mitochondrion | 5.43 | 34.65 |
| KXG25227 | Sorghum | mitochondrion | 5.43 | 34.65 |
| PGSC0003DMT400096005 | Potato | cytosol, mitochondrion, nucleus | 6.17 | 34.01 |
| VIT_08s0056g01130.t01 | Wine grape | nucleus | 5.56 | 33.33 |
| CDY46298 | Canola | cytosol | 3.46 | 33.33 |
| PGSC0003DMT400084919 | Potato | nucleus | 7.04 | 32.57 |
| PGSC0003DMT400086860 | Potato | cytosol | 4.57 | 31.09 |
| PGSC0003DMT400090846 | Potato | cytosol | 4.44 | 29.75 |
| PGSC0003DMT400033624 | Potato | nucleus | 8.52 | 28.75 |
| Bra039615.1-P | Field mustard | cytosol | 6.42 | 28.73 |
| PGSC0003DMT400060623 | Potato | nucleus | 8.52 | 28.4 |
| PGSC0003DMT400053397 | Potato | nucleus | 10.0 | 28.22 |
| PGSC0003DMT400009581 | Potato | nucleus | 8.15 | 23.24 |
| PGSC0003DMT400080288 | Potato | nucleus | 8.15 | 23.0 |
| PGSC0003DMT400083993 | Potato | nucleus | 5.06 | 22.91 |
| PGSC0003DMT400035635 | Potato | nucleus | 8.52 | 22.48 |
| PGSC0003DMT400017840 | Potato | nucleus | 8.4 | 20.67 |
| PGSC0003DMT400034368 | Potato | nucleus | 8.64 | 20.23 |
| PGSC0003DMT400009033 | Potato | nucleus | 7.04 | 18.87 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400044270 | EnsemblPlantsGene:PGSC0003DMG401017193 | EntrezGene:102604540 | InterPro:DUF4283 | InterPro:IPR006456 | InterPro:ZF_HD_homeobox_Cys/His_dimer |
| PANTHER:PTHR31948 | PFAM:PD125774 | PFAM:PF04770 | PFAM:PF14111 | PFscan:PS51523 | PGSC:PGSC0003DMG401017193 |
| RefSeq:XP_006354529.1 | SEG:seg | TIGRFAMs:TIGR01566 | UniParc:UPI000294CBD2 | UniProt:M1BFX2 | MapMan:15.5.3.13 |
Description
Mini zinc finger 1 [Source:PGSC_GENE;Acc:PGSC0003DMG401017193]
Coordinates
chr9:-:55782532..55788505
Molecular Weight (calculated)
90983.5 Da
IEP (calculated)
7.697
GRAVY (calculated)
-0.631
Length
810 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAPQIDFNS ENQEPKSKIV YLNYRRMPAA IFRKKYWDWN SMVSVCKLTM VGNFFIPKPK MTKIRVSFQA KLSLKGVVKI RSYDSYHVFL DFTAEEDYQS
101: VLLKERVVVA GAIMEVFRWT PEFHDQFREA FGVVELDNTK RDEHIGGGNE YGTEESDSVD CVPEVTNSDS EDRVASPIKC ETSKLPSSVG ISCSGFSGLS
201: SAPYRITGRI PSVTYENSTM CSTDLVPIRG TYLNHNNLKS YSREWNYGSK PTSEAADLAC ETLSQPLYAL SIVERHENQK SRPPIKVQHS TYMGYPTVNF
301: PRSYGESLVS DYKLTLLGNF SYKRPKMKEI RADFKAQNPL NGQVKIRNCS SRQVLILFTN EEDYYTVLYK KAFIVAGALM QISWSSPDFH HEVKQNIYPD
401: FRLSDAKSVN WNTDPSKLHP SINGLSAPAT DEKPMSLQVP AVSQCLSVPS IRPPLPLLAH SVSVAGRLCA DRLTTSGIYV PQSYPKGILG SPIFGRNEQA
501: GRGSTFPSPS QALDQSSLAQ QHNQLNSYKE PKMTVRIAQS QPPSTTSVSD TTSSIRYREC LKNHAASMGG HALDGCGEFM PSGEEGTPGA LKCAACNCHQ
601: NFHRKEIDDY QQMDDVGSHS RFSQPRNNSS SGSIQNQSPI SLPTQQLQQY HHDYSNSCSP RSLVDSLQPY TQPPSPTSGS VFSQQAWERI EPSSIRPSYS
701: YEMVNHNTMQ NGKQREYSWS DSSSNTSRSR DHPSIRNENW NFDMFKPLNN RTPDHIPLEF PAYPSRCQPQ TVFADEFPHL DIINNLLHEE HGTGRTLMSN
801: SGFQRLNNGS
101: VLLKERVVVA GAIMEVFRWT PEFHDQFREA FGVVELDNTK RDEHIGGGNE YGTEESDSVD CVPEVTNSDS EDRVASPIKC ETSKLPSSVG ISCSGFSGLS
201: SAPYRITGRI PSVTYENSTM CSTDLVPIRG TYLNHNNLKS YSREWNYGSK PTSEAADLAC ETLSQPLYAL SIVERHENQK SRPPIKVQHS TYMGYPTVNF
301: PRSYGESLVS DYKLTLLGNF SYKRPKMKEI RADFKAQNPL NGQVKIRNCS SRQVLILFTN EEDYYTVLYK KAFIVAGALM QISWSSPDFH HEVKQNIYPD
401: FRLSDAKSVN WNTDPSKLHP SINGLSAPAT DEKPMSLQVP AVSQCLSVPS IRPPLPLLAH SVSVAGRLCA DRLTTSGIYV PQSYPKGILG SPIFGRNEQA
501: GRGSTFPSPS QALDQSSLAQ QHNQLNSYKE PKMTVRIAQS QPPSTTSVSD TTSSIRYREC LKNHAASMGG HALDGCGEFM PSGEEGTPGA LKCAACNCHQ
601: NFHRKEIDDY QQMDDVGSHS RFSQPRNNSS SGSIQNQSPI SLPTQQLQQY HHDYSNSCSP RSLVDSLQPY TQPPSPTSGS VFSQQAWERI EPSSIRPSYS
701: YEMVNHNTMQ NGKQREYSWS DSSSNTSRSR DHPSIRNENW NFDMFKPLNN RTPDHIPLEF PAYPSRCQPQ TVFADEFPHL DIINNLLHEE HGTGRTLMSN
801: SGFQRLNNGS
001: MDMRSHEMIE RRREDNGNNN GGVVISNIIS TNIDDNCNGN NNNTRVSCNS QTLDHHQSKS PSSFSISAAA KPTVRYRECL KNHAASVGGS VHDGCGEFMP
101: SGEEGTIEAL RCAACDCHRN FHRKEMDGVG SSDLISHHRH HHYHHNQYGG GGGRRPPPPN MMLNPLMLPP PPNYQPIHHH KYGMSPPGGG GMVTPMSVAY
201: GGGGGGAESS SEDLNLYGQS SGEGAGAAAG QMAFSMSSSK KRFRTKFTTD QKERMMDFAE KLGWRMNKQD EEELKRFCGE IGVKRQVFKV WMHNNKNNAK
301: KPPTPTTTL
101: SGEEGTIEAL RCAACDCHRN FHRKEMDGVG SSDLISHHRH HHYHHNQYGG GGGRRPPPPN MMLNPLMLPP PPNYQPIHHH KYGMSPPGGG GMVTPMSVAY
201: GGGGGGAESS SEDLNLYGQS SGEGAGAAAG QMAFSMSSSK KRFRTKFTTD QKERMMDFAE KLGWRMNKQD EEELKRFCGE IGVKRQVFKV WMHNNKNNAK
301: KPPTPTTTL
Arabidopsis Description
ZHD5ZHD5 [Source:UniProtKB/TrEMBL;Acc:A0A178WFZ4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.