Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 3
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_17s0000g06200.t01 | Wine grape | cytosol | 28.15 | 77.55 |
| VIT_14s0108g00760.t01 | Wine grape | mitochondrion | 40.0 | 56.84 |
| GSMUA_AchrUn_... | Banana | cytosol | 37.04 | 53.76 |
| VIT_01s0026g02450.t01 | Wine grape | cytosol | 33.33 | 52.94 |
| Os08t0438100-01 | Rice | cytosol | 31.85 | 46.24 |
| TraesCS5A01G227200.1 | Wheat | mitochondrion | 31.85 | 46.24 |
| TraesCS5B01G226000.1 | Wheat | mitochondrion | 31.85 | 46.24 |
| TraesCS5D01G234700.1 | Wheat | mitochondrion | 31.85 | 46.24 |
| GSMUA_Achr6P30650_001 | Banana | mitochondrion | 31.85 | 45.26 |
| VIT_14s0108g00810.t01 | Wine grape | cytosol | 39.26 | 41.09 |
| Zm00001d032177_P001 | Maize | mitochondrion | 35.56 | 40.34 |
| Zm00001d050452_P001 | Maize | mitochondrion | 36.3 | 38.58 |
| KXG35630 | Sorghum | nucleus | 31.11 | 38.18 |
| KXG25227 | Sorghum | mitochondrion | 35.56 | 37.8 |
| Zm00001d020459_P001 | Maize | mitochondrion | 29.63 | 36.04 |
| CDY46298 | Canola | cytosol | 13.33 | 21.43 |
| Bra039615.1-P | Field mustard | cytosol | 28.15 | 20.99 |
| VIT_00s0199g00250.t01 | Wine grape | nucleus | 34.81 | 19.26 |
| VIT_17s0000g00810.t01 | Wine grape | nucleus | 21.48 | 18.71 |
| VIT_18s0001g07140.t01 | Wine grape | nucleus | 30.37 | 17.83 |
| VIT_12s0035g01880.t01 | Wine grape | nucleus | 31.85 | 15.3 |
| VIT_18s0001g12580.t01 | Wine grape | nucleus | 31.11 | 13.29 |
| VIT_18s0117g00270.t01 | Wine grape | nucleus | 25.19 | 12.5 |
| VIT_14s0108g00750.t01 | Wine grape | nucleus | 27.41 | 10.42 |
| PGSC0003DMT400044269 | Potato | nucleus | 31.85 | 10.26 |
| VIT_04s0023g01880.t01 | Wine grape | nucleus | 29.63 | 9.24 |
| VIT_01s0026g02460.t01 | Wine grape | nucleus | 11.85 | 6.96 |
| Solyc09g089550.2.1 | Tomato | nucleus | 33.33 | 5.59 |
| PGSC0003DMT400044270 | Potato | cytosol | 33.33 | 5.56 |
| VIT_07s0130g00240.t01 | Wine grape | nucleus | 7.41 | 5.05 |
| VIT_10s0042g00210.t01 | Wine grape | nucleus | 3.7 | 2.49 |
Protein Annotations
| ArrayExpress:VIT_08s0056g01130 | EMBL:AM430770 | EMBL:FN595995 | EnsemblPlants:VIT_08s0056g01130.t01 | EnsemblPlantsGene:VIT_08s0056g01130 | InterPro:IPR006456 |
| InterPro:ZF_HD_homeobox_Cys/His_dimer | PANTHER:PTHR31948 | PANTHER:PTHR31948:SF7 | PFAM:PD125774 | PFAM:PF04770 | PFscan:PS51523 |
| ProteinID:CAN66937 | ProteinID:CAN66937.1 | ProteinID:CCB55995 | ProteinID:CCB55995.1 | TIGRFAMs:TIGR01566 | UniParc:UPI000151EF83 |
| UniProt:A5ANG8 | MapMan:15.5.3.13 | : | : | : | : |
Description
No Description!
Coordinates
chr8:-:1728128..1728934
Molecular Weight (calculated)
15214.8 Da
IEP (calculated)
8.579
GRAVY (calculated)
-0.831
Length
135 amino acids
Sequence
(BLAST)
(BLAST)
001: MRNSFATTRH YSPSNRRSGM SSPSMFVEEQ DQKTLQLSHD LKDKKHKEQK NAAVFPEKAL SYKEKNVIYK ECRKNHAASI GGYAVDGCRE FMAAGEEGTS
101: ASFKCAACSC HRNFHRKEVE SECFCDCSSI STTLK
101: ASFKCAACSC HRNFHRKEVE SECFCDCSSI STTLK
1: MRKRQVVLRR ASPEEPSRSS STASSLTVRT VRYGECQKNH AAAVGGYAVD GCREFMASRG EEGTVAALTC AACGCHRSFH RREIETEVVC DCNSPPSTGN
Arabidopsis Description
MIF2Mini zinc finger protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9LJW5]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.