Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY46298 | Canola | cytosol | 46.41 | 100.0 |
| Bra037224.1-P | Field mustard | nucleus | 71.82 | 49.06 |
| Bra031051.1-P | Field mustard | mitochondrion | 20.44 | 42.05 |
| Bra025688.1-P | Field mustard | mitochondrion | 20.44 | 42.05 |
| Bra025362.1-P | Field mustard | mitochondrion | 22.65 | 41.0 |
| Bra016538.1-P | Field mustard | mitochondrion | 19.89 | 40.91 |
| Bra039039.1-P | Field mustard | mitochondrion | 22.1 | 40.82 |
| Bra015898.1-P | Field mustard | mitochondrion | 20.99 | 40.43 |
| GSMUA_AchrUn_... | Banana | cytosol | 19.89 | 38.71 |
| Bra003791.1-P | Field mustard | mitochondrion | 20.44 | 38.14 |
| Os08t0438100-01 | Rice | cytosol | 19.34 | 37.63 |
| TraesCS5D01G234700.1 | Wheat | mitochondrion | 18.23 | 35.48 |
| TraesCS5A01G227200.1 | Wheat | mitochondrion | 18.23 | 35.48 |
| TraesCS5B01G226000.1 | Wheat | mitochondrion | 17.68 | 34.41 |
| Zm00001d032177_P001 | Maize | mitochondrion | 21.55 | 32.77 |
| GSMUA_Achr6P30650_001 | Banana | mitochondrion | 17.13 | 32.63 |
| Zm00001d020459_P001 | Maize | mitochondrion | 19.34 | 31.53 |
| KXG35630 | Sorghum | nucleus | 18.78 | 30.91 |
| Zm00001d050452_P001 | Maize | mitochondrion | 21.55 | 30.71 |
| KXG25227 | Sorghum | mitochondrion | 20.99 | 29.92 |
| VIT_08s0056g01130.t01 | Wine grape | nucleus | 20.99 | 28.15 |
| Bra036852.1-P | Field mustard | nucleus | 21.55 | 17.81 |
| Bra010485.1-P | Field mustard | nucleus | 20.44 | 17.62 |
| Bra013822.1-P | Field mustard | nucleus | 21.55 | 17.33 |
| Bra003759.1-P | Field mustard | nucleus | 27.07 | 16.67 |
| Bra008185.1-P | Field mustard | nucleus | 25.97 | 15.99 |
| Bra015857.1-P | Field mustard | nucleus | 26.52 | 15.89 |
| Bra037816.1-P | Field mustard | nucleus | 19.89 | 14.88 |
| Bra007869.1-P | Field mustard | nucleus | 18.78 | 14.78 |
| Bra004399.1-P | Field mustard | nucleus | 18.78 | 14.72 |
| Bra026589.1-P | Field mustard | nucleus | 23.76 | 14.33 |
| Bra006657.1-P | Field mustard | nucleus | 14.36 | 14.29 |
| Bra031859.1-P | Field mustard | nucleus | 20.99 | 13.97 |
| Bra012882.1-P | Field mustard | nucleus | 20.44 | 13.96 |
| Bra026830.1-P | Field mustard | nucleus | 22.1 | 12.74 |
| Bra024382.1-P | Field mustard | nucleus | 20.44 | 12.63 |
| Bra026219.1-P | Field mustard | nucleus | 21.55 | 12.58 |
| Bra027455.1-P | Field mustard | nucleus | 19.89 | 12.54 |
| Bra039038.1-P | Field mustard | nucleus | 20.99 | 12.3 |
| Bra008712.1-P | Field mustard | cytosol | 17.68 | 12.17 |
| Bra025644.1-P | Field mustard | nucleus | 19.89 | 11.36 |
| PGSC0003DMT400044269 | Potato | nucleus | 25.97 | 11.22 |
| Bra025363.1-P | Field mustard | nucleus | 20.99 | 11.05 |
| PGSC0003DMT400044270 | Potato | cytosol | 28.73 | 6.42 |
| Solyc09g089550.2.1 | Tomato | nucleus | 28.18 | 6.34 |
Protein Annotations
| EnsemblPlants:Bra039615.1 | EnsemblPlants:Bra039615.1-P | EnsemblPlantsGene:Bra039615 | InterPro:IPR006456 | InterPro:ZF_HD_homeobox_Cys/His_dimer | ncoils:Coil |
| PANTHER:PTHR31948 | PANTHER:PTHR31948:SF9 | PFAM:PD125774 | PFAM:PF04770 | PFscan:PS51523 | TIGRFAMs:TIGR01566 |
| UniParc:UPI000254110C | UniProt:M4FEU3 | MapMan:15.5.3.13 | : | : | : |
Description
AT2G18350 (E=1e-062) AtHB24 | AtHB24 (ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 24); DNA binding / transcription factor
Coordinates
chrA07:+:1479072..1479617
Molecular Weight (calculated)
19680.2 Da
IEP (calculated)
8.498
GRAVY (calculated)
-0.549
Length
181 amino acids
Sequence
(BLAST)
(BLAST)
001: MGDGKTKIIS KPSTPDHRIP PYTCSQTTEK ENPTTIRNGS NPDPDLDTNP NSFAAPAPRS YVRPQTTSLT KSVRYKECQR NHAASSGGHV IDGCGAFMSS
101: GKEGTAESLL CAACDFHRSF HRNKIDGMFV VKFNSFGLSP RPLVSRHVSP VMMSFARGGK DPAESSTEDL NSFINLLVVM E
101: GKEGTAESLL CAACDFHRSF HRNKIDGMFV VKFNSFGLSP RPLVSRHVSP VMMSFARGGK DPAESSTEDL NSFINLLVVM E
001: MEVREKKDEK MEMTRRKSSA LDHHRLPPYT YSQTANKEKP TTKRNGSDPD PDPDLDTNPI SISHAPRSYA RPQTTSPGKA RYRECQKNHA ASSGGHVVDG
101: CGEFMSSGEE GTVESLLCAA CDCHRSFHRK EIDGLFVVNF NSFGHSQRPL GSRHVSPIMM SFGGGGGCAA ESSTEDLNKF HQSFSGYGVD QFHHYQPKKR
201: FRTKFNEEQK EKMMEFAEKI GWRMTKLEDD EVNRFCREIK VKRQVFKVWM HNNKQAAKKK DL
101: CGEFMSSGEE GTVESLLCAA CDCHRSFHRK EIDGLFVVNF NSFGHSQRPL GSRHVSPIMM SFGGGGGCAA ESSTEDLNKF HQSFSGYGVD QFHHYQPKKR
201: FRTKFNEEQK EKMMEFAEKI GWRMTKLEDD EVNRFCREIK VKRQVFKVWM HNNKQAAKKK DL
Arabidopsis Description
ZHD6Zinc-finger homeodomain protein 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZPW7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.