Factsheet for Bra039039.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 6
nucleus 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY20009	Canola	mitochondrion	100.0	100.0
CDY00105	Canola	mitochondrion	96.94	96.94
CDX86404	Canola	mitochondrion	87.76	94.51
Bra025362.1-P	Field mustard	mitochondrion	94.9	93.0
AT3G28917.1	Thale cress	mitochondrion	93.88	92.0
KRH18477	Soybean	cytosol, mitochondrion	63.27	75.61
KRG93529	Soybean	cytosol, mitochondrion	69.39	70.1
Bra031051.1-P	Field mustard	mitochondrion	60.2	67.05
Bra025688.1-P	Field mustard	mitochondrion	59.18	65.91
Bra016538.1-P	Field mustard	mitochondrion	59.18	65.91
VIT_14s0108g00810.t01	Wine grape	cytosol	78.57	59.69
Bra015898.1-P	Field mustard	mitochondrion	56.12	58.51
Bra003791.1-P	Field mustard	mitochondrion	57.14	57.73
Bra039615.1-P	Field mustard	cytosol	40.82	22.1
Bra013822.1-P	Field mustard	nucleus	42.86	18.67
Bra010485.1-P	Field mustard	nucleus	38.78	18.1
Bra036852.1-P	Field mustard	nucleus	38.78	17.35
Bra037224.1-P	Field mustard	nucleus	44.9	16.6
Bra037816.1-P	Field mustard	nucleus	39.8	16.12
Bra006657.1-P	Field mustard	nucleus	28.57	15.38
Bra012882.1-P	Field mustard	nucleus	39.8	14.72
Bra026589.1-P	Field mustard	nucleus	42.86	14.0
Bra004399.1-P	Field mustard	nucleus	32.65	13.85
Bra003759.1-P	Field mustard	nucleus	40.82	13.61
Bra008185.1-P	Field mustard	nucleus	40.82	13.61
Bra031859.1-P	Field mustard	nucleus	37.76	13.6
Bra015857.1-P	Field mustard	nucleus	41.84	13.58
Bra007869.1-P	Field mustard	nucleus	31.63	13.48
Bra024382.1-P	Field mustard	nucleus	39.8	13.31
Bra008712.1-P	Field mustard	cytosol	35.71	13.31
Bra026830.1-P	Field mustard	nucleus	41.84	13.06
Bra026219.1-P	Field mustard	nucleus	40.82	12.9
Bra039038.1-P	Field mustard	nucleus	38.78	12.3
Bra027455.1-P	Field mustard	nucleus	32.65	11.15
Bra025644.1-P	Field mustard	nucleus	35.71	11.04
Bra025363.1-P	Field mustard	nucleus	37.76	10.76

Protein Annotations

EnsemblPlants:Bra039039.1	EnsemblPlants:Bra039039.1-P	EnsemblPlantsGene:Bra039039	InterPro:IPR006456	InterPro:ZF_HD_homeobox_Cys/His_dimer	PANTHER:PTHR31948
PANTHER:PTHR31948:SF7	PFAM:PD125774	PFAM:PF04770	PFscan:PS51523	SEG:seg	TIGRFAMs:TIGR01566
UniParc:UPI0002541C14	UniProt:M4FD69	MapMan:15.5.3.13	:	:	:

Description

AT3G28917 (E=2e-038) MIF2 | MIF2 (MINI ZINC FINGER 2); DNA binding

Coordinates

chrA09:+:1484861..1485157

Molecular Weight (calculated)

10569.4 Da

IEP (calculated)

8.293

GRAVY (calculated)

-0.621

Length

98 amino acids

Sequence
(BLAST)

1: MRKRQVVLRR ASPEEPSRSS STASSRMVRG VRYGECQKNH AAAVGGYAVD GCREFMASNG EEGTVSALTC AACGCHRSFH RRETEVVCDC ESPPSTGN

Best Arabidopsis Sequence Match ( AT3G28917.1 )
(BLAST)

1: MRKRQVVLRR ASPEEPSRSS STASSLTVRT VRYGECQKNH AAAVGGYAVD GCREFMASRG EEGTVAALTC AACGCHRSFH RREIETEVVC DCNSPPSTGN

Arabidopsis Description

MIF2Mini zinc finger protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9LJW5]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.