Factsheet for Bra013822.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY34299	Canola	nucleus	98.67	98.67
Bra010485.1-P	Field mustard	nucleus	82.22	88.1
AT4G24660.2	Thale cress	nucleus	87.11	84.85
Bra031051.1-P	Field mustard	mitochondrion	20.89	53.41
Bra025688.1-P	Field mustard	mitochondrion	19.56	50.0
Bra016538.1-P	Field mustard	mitochondrion	19.11	48.86
Bra015898.1-P	Field mustard	mitochondrion	18.67	44.68
Bra003791.1-P	Field mustard	mitochondrion	19.11	44.33
Bra025362.1-P	Field mustard	mitochondrion	19.56	44.0
Bra039039.1-P	Field mustard	mitochondrion	18.67	42.86
Bra037816.1-P	Field mustard	nucleus	45.78	42.56
Bra036852.1-P	Field mustard	nucleus	37.78	38.81
Bra031859.1-P	Field mustard	nucleus	46.22	38.24
Bra024382.1-P	Field mustard	nucleus	48.44	37.2
Bra006657.1-P	Field mustard	nucleus	29.78	36.81
Bra004399.1-P	Field mustard	nucleus	37.33	36.36
Bra007869.1-P	Field mustard	nucleus	36.44	35.65
Bra003759.1-P	Field mustard	nucleus	42.67	32.65
Bra008185.1-P	Field mustard	nucleus	42.67	32.65
Bra015857.1-P	Field mustard	nucleus	43.11	32.12
Bra026589.1-P	Field mustard	nucleus	42.67	32.0
Bra037224.1-P	Field mustard	nucleus	36.89	31.32
Bra026830.1-P	Field mustard	nucleus	43.11	30.89
Bra026219.1-P	Field mustard	nucleus	41.33	30.0
Bra008712.1-P	Field mustard	cytosol	34.22	29.28
Bra012882.1-P	Field mustard	nucleus	33.78	28.68
Bra039038.1-P	Field mustard	nucleus	37.78	27.51
Bra025644.1-P	Field mustard	nucleus	36.0	25.55
Bra025363.1-P	Field mustard	nucleus	36.89	24.13
Bra027455.1-P	Field mustard	nucleus	27.56	21.6
Bra039615.1-P	Field mustard	cytosol	17.33	21.55

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.3.13	EnsemblPlantsGene:Bra013822	EnsemblPlants:Bra013822.1	EnsemblPlants:Bra013822.1-P	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	InterPro:Homeobox-like_sf	InterPro:Homeodomain_ZF_HD	InterPro:IPR006456
UniProt:M4DBG2	PFAM:PD125774	PFAM:PF04770	PFscan:PS51523	PANTHER:PTHR31948	PANTHER:PTHR31948:SF5
SUPFAM:SSF46689	TIGRFAMs:TIGR01565	TIGRFAMs:TIGR01566	UniParc:UPI0002546470	InterPro:ZF_HD_homeobox_Cys/His_dimer	SEG:seg

Description

AT4G24660 (E=2e-095) ATHB22, MEE68 | ATHB22 (HOMEOBOX PROTEIN 22); DNA binding / transcription factor

Coordinates

chrA01:-:7944709..7945386

Molecular Weight (calculated)

24378.5 Da

IEP (calculated)

8.289

GRAVY (calculated)

-0.863

Length

225 amino acids

Sequence
(BLAST)

001: MNFEEQEEEM EMSGANPTGG YDSLSGEGAT SSGGGGGGGS RKTVGGSKVR YRECLKNHAV NIGGHAVDGC CEFMPSGEDG SLDALKCAAC GCHRNFHRKE
101: TEVMSGRAHR VPTYYNRPPQ LPPPGYLHLT SPAAAGQPYR PPAASGDEED TSNPSSSGGT RAKRFRTKFT AEQKEKMLAF AERLGWRIQK HDDATVEQFC
201: AETGVRRQVL KIWMHNNKNS LGKKP

Best Arabidopsis Sequence Match ( AT4G24660.1 )
(BLAST)

001: MNFEDQEEDM EMSGVNPPCG YDSLSGEGAT SSGGGGVGRS KGVGAKIRYR ECLKNHAVNI GGHAVDGCCE FMPSGEDGTL DALKCAACGC HRNFHRKETE
101: SIGGRAHRVP TYYNRPPQPH QPPGYLHLTS PAAPYRPPAA SGDEEDTSNP SSSGGTTKRF RTKFTAEQKE KMLAFAERLG WRIQKHDDVA VEQFCAETGV
201: RRQVLKIWMH NNKNSLGKKP

Arabidopsis Description

ATHB22homeobox protein 22 [Source:TAIR;Acc:AT4G24660]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.