Factsheet for Bra025688.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
cytosol 2
plastid 1
mitochondrion 5
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:	secretory
EpiLoc:	cytosol
iPSORT:	plastid
MultiLoc:	mitochondrion
Plant-mPloc:	nucleus
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY19248	Canola	mitochondrion	100.0	100.0
CDY26722	Canola	mitochondrion	100.0	100.0
Bra016538.1-P	Field mustard	mitochondrion	93.18	93.18
Bra031051.1-P	Field mustard	mitochondrion	92.05	92.05
AT1G18835.1	Thale cress	mitochondrion	90.91	90.91
Bra003791.1-P	Field mustard	mitochondrion	86.36	78.35
KRH54551	Soybean	cytosol, mitochondrion	78.41	77.53
KRH63346	Soybean	cytosol, mitochondrion	78.41	77.53
Bra015898.1-P	Field mustard	mitochondrion	80.68	75.53
Solyc03g116070.1.1	Tomato	mitochondrion	69.32	73.49
PGSC0003DMT400050286	Potato	mitochondrion	68.18	72.29
KRH56913	Soybean	cytosol	64.77	72.15
KRH03476	Soybean	cytosol	63.64	70.89
VIT_01s0026g02450.t01	Wine grape	cytosol	57.95	60.0
Bra039039.1-P	Field mustard	mitochondrion	65.91	59.18
Bra025362.1-P	Field mustard	mitochondrion	65.91	58.0
Bra039615.1-P	Field mustard	cytosol	42.05	20.44
Bra013822.1-P	Field mustard	nucleus	50.0	19.56
Bra010485.1-P	Field mustard	nucleus	46.59	19.52
Bra036852.1-P	Field mustard	nucleus	45.45	18.26
Bra037816.1-P	Field mustard	nucleus	48.86	17.77
Bra006657.1-P	Field mustard	nucleus	32.95	15.93
Bra004399.1-P	Field mustard	nucleus	40.91	15.58
Bra037224.1-P	Field mustard	nucleus	46.59	15.47
Bra007869.1-P	Field mustard	nucleus	39.77	15.22
Bra012882.1-P	Field mustard	nucleus	44.32	14.72
Bra031859.1-P	Field mustard	nucleus	45.45	14.71
Bra024382.1-P	Field mustard	nucleus	48.86	14.68
Bra026589.1-P	Field mustard	nucleus	48.86	14.33
Bra008712.1-P	Field mustard	cytosol	42.05	14.07
Bra008185.1-P	Field mustard	nucleus	45.45	13.61
Bra039038.1-P	Field mustard	nucleus	46.59	13.27
Bra015857.1-P	Field mustard	nucleus	45.45	13.24
Bra026830.1-P	Field mustard	nucleus	46.59	13.06
Bra003759.1-P	Field mustard	nucleus	43.18	12.93
Bra026219.1-P	Field mustard	nucleus	45.45	12.9
Bra025644.1-P	Field mustard	nucleus	43.18	11.99
Bra025363.1-P	Field mustard	nucleus	45.45	11.63
Bra027455.1-P	Field mustard	nucleus	36.36	11.15

Protein Annotations

EnsemblPlants:Bra025688.1	EnsemblPlants:Bra025688.1-P	EnsemblPlantsGene:Bra025688	InterPro:IPR006456	InterPro:ZF_HD_homeobox_Cys/His_dimer	PANTHER:PTHR31948
PANTHER:PTHR31948:SF7	PFAM:PD125774	PFAM:PF04770	PFscan:PS51523	TIGRFAMs:TIGR01566	UniParc:UPI000253F4C6
UniProt:M4EA80	MapMan:15.5.3.13	:	:	:	:

Description

AT1G18835 (E=1e-042) MIF3 | MIF3 (MINI ZINC FINGER)

Coordinates

chrA06:-:7305058..7305324

Molecular Weight (calculated)

9832.6 Da

IEP (calculated)

8.376

GRAVY (calculated)

-0.685

Length

88 amino acids

Sequence
(BLAST)

1: MKKRQVVIKQ RKISYTTTTS SSNVRYVECQ KNHAANIGGY AVDGCREFMA RGGEGTDDAL TCAACGCHRN FHRREVETEV VCEYSPPN

Best Arabidopsis Sequence Match ( AT1G18835.1 )
(BLAST)

1: MKKRQVVIKQ RKSSYTMTSS SSNVRYVECQ KNHAANIGGY AVDGCREFMA SGGDDALTCA ACGCHRNFHR REVDTEVVCE YSPPNANN

Arabidopsis Description

MIF3MIF3 [Source:UniProtKB/TrEMBL;Acc:A0A178W7X3]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.