Factsheet for Bra016538.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
mitochondrion 5
nucleus 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, mitochondrion, nucleus, secretory
BaCelLo:	secretory
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Plant-mPloc:	nucleus
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX96695	Canola	mitochondrion	100.0	100.0
Bra031051.1-P	Field mustard	mitochondrion	93.18	93.18
Bra025688.1-P	Field mustard	mitochondrion	93.18	93.18
AT1G18835.1	Thale cress	mitochondrion	89.77	89.77
KRH54551	Soybean	cytosol, mitochondrion	78.41	77.53
KRH63346	Soybean	cytosol, mitochondrion	78.41	77.53
Bra003791.1-P	Field mustard	mitochondrion	81.82	74.23
Bra015898.1-P	Field mustard	mitochondrion	78.41	73.4
KRH56913	Soybean	cytosol	64.77	72.15
KRH03476	Soybean	cytosol	63.64	70.89
Solyc03g116070.1.1	Tomato	mitochondrion	65.91	69.88
PGSC0003DMT400050286	Potato	mitochondrion	64.77	68.67
VIT_01s0026g02450.t01	Wine grape	cytosol	57.95	60.0
Bra039039.1-P	Field mustard	mitochondrion	65.91	59.18
Bra025362.1-P	Field mustard	mitochondrion	65.91	58.0
Bra039615.1-P	Field mustard	cytosol	40.91	19.89
Bra010485.1-P	Field mustard	nucleus	46.59	19.52
Bra013822.1-P	Field mustard	nucleus	48.86	19.11
Bra036852.1-P	Field mustard	nucleus	44.32	17.81
Bra037816.1-P	Field mustard	nucleus	46.59	16.94
Bra037224.1-P	Field mustard	nucleus	45.45	15.09
Bra006657.1-P	Field mustard	nucleus	30.68	14.84
Bra004399.1-P	Field mustard	nucleus	38.64	14.72
Bra007869.1-P	Field mustard	nucleus	37.5	14.35
Bra012882.1-P	Field mustard	nucleus	43.18	14.34
Bra026589.1-P	Field mustard	nucleus	48.86	14.33
Bra008712.1-P	Field mustard	cytosol	42.05	14.07
Bra024382.1-P	Field mustard	nucleus	46.59	13.99
Bra031859.1-P	Field mustard	nucleus	43.18	13.97
Bra008185.1-P	Field mustard	nucleus	46.59	13.95
Bra015857.1-P	Field mustard	nucleus	46.59	13.58
Bra003759.1-P	Field mustard	nucleus	44.32	13.27
Bra026830.1-P	Field mustard	nucleus	46.59	13.06
Bra026219.1-P	Field mustard	nucleus	45.45	12.9
Bra039038.1-P	Field mustard	nucleus	44.32	12.62
Bra025644.1-P	Field mustard	nucleus	40.91	11.36
Bra025363.1-P	Field mustard	nucleus	43.18	11.05
Bra027455.1-P	Field mustard	nucleus	35.23	10.8

Protein Annotations

EnsemblPlants:Bra016538.1	EnsemblPlants:Bra016538.1-P	EnsemblPlantsGene:Bra016538	InterPro:IPR006456	InterPro:ZF_HD_homeobox_Cys/His_dimer	PANTHER:PTHR31948
PANTHER:PTHR31948:SF7	PFAM:PD125774	PFAM:PF04770	PFscan:PS51523	SEG:seg	TIGRFAMs:TIGR01566
UniParc:UPI0002546F38	UniProt:M4DJ60	MapMan:15.5.3.13	:	:	:

Description

AT1G18835 (E=4e-038) MIF3 | MIF3 (MINI ZINC FINGER)

Coordinates

chrA08:+:18931963..18932229

Molecular Weight (calculated)

9845.5 Da

IEP (calculated)

8.376

GRAVY (calculated)

-0.749

Length

88 amino acids

Sequence
(BLAST)

1: MKKRQVVIKQ RKNSYTTTSS SSNVRYIECQ KNHAANIGGY AVDGCREFIA SGGEGTDDAL TCAACRCHRN FHRREVETEV VCEYSPPN

Best Arabidopsis Sequence Match ( AT1G18835.1 )
(BLAST)

1: MKKRQVVIKQ RKSSYTMTSS SSNVRYVECQ KNHAANIGGY AVDGCREFMA SGGDDALTCA ACGCHRNFHR REVDTEVVCE YSPPNANN

Arabidopsis Description

MIF3MIF3 [Source:UniProtKB/TrEMBL;Acc:A0A178W7X3]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.