Factsheet for Bra026589.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY09363	Canola	nucleus	96.0	96.64
CDY41692	Canola	nucleus	95.67	95.67
AT2G02540.2	Thale cress	nucleus	72.67	70.32
Bra026219.1-P	Field mustard	nucleus	56.33	54.52
Bra026830.1-P	Field mustard	nucleus	57.0	54.46
GSMUA_Achr1P13300_001	Banana	nucleus	39.33	52.21
GSMUA_Achr6P28870_001	Banana	nucleus	38.33	50.88
GSMUA_Achr6P17420_001	Banana	nucleus	34.33	49.76
GSMUA_Achr3P16680_001	Banana	nucleus	38.33	49.36
Bra031051.1-P	Field mustard	mitochondrion	14.33	48.86
Bra025688.1-P	Field mustard	mitochondrion	14.33	48.86
Bra016538.1-P	Field mustard	mitochondrion	14.33	48.86
GSMUA_Achr10P...	Banana	nucleus	39.0	48.35
GSMUA_Achr9P08090_001	Banana	nucleus	38.67	48.13
VIT_12s0035g01880.t01	Wine grape	nucleus	43.33	46.26
Bra025362.1-P	Field mustard	mitochondrion	15.0	45.0
KRH51275	Soybean	nucleus	42.33	44.88
Bra015898.1-P	Field mustard	mitochondrion	14.0	44.68
KRH01880	Soybean	nucleus	42.0	44.06
PGSC0003DMT400053397	Potato	nucleus	41.0	42.86
Bra039039.1-P	Field mustard	mitochondrion	14.0	42.86
Bra013822.1-P	Field mustard	nucleus	32.0	42.67
Solyc01g102980.2.1	Tomato	nucleus	41.0	42.41
Bra010485.1-P	Field mustard	nucleus	29.67	42.38
Bra003791.1-P	Field mustard	mitochondrion	13.0	40.21
Bra036852.1-P	Field mustard	nucleus	27.67	37.9
Bra037816.1-P	Field mustard	nucleus	29.67	36.78
Bra006657.1-P	Field mustard	nucleus	22.0	36.26
Bra031859.1-P	Field mustard	nucleus	31.67	34.93
Bra007869.1-P	Field mustard	nucleus	26.67	34.78
Bra004399.1-P	Field mustard	nucleus	26.0	33.77
Bra003759.1-P	Field mustard	nucleus	31.67	32.31
Bra008185.1-P	Field mustard	nucleus	31.67	32.31
Bra024382.1-P	Field mustard	nucleus	31.33	32.08
Bra037224.1-P	Field mustard	nucleus	28.33	32.08
Bra015857.1-P	Field mustard	nucleus	31.67	31.46
Bra008712.1-P	Field mustard	cytosol	27.0	30.8
KXG23238	Sorghum	nucleus	33.33	30.49
Zm00001d041780_P001	Maize	nucleus	33.67	28.94
TraesCS4D01G086300.1	Wheat	nucleus	37.0	28.53
KXG28111	Sorghum	nucleus	37.0	28.17
Bra012882.1-P	Field mustard	nucleus	24.67	27.92
Bra039038.1-P	Field mustard	nucleus	28.67	27.83
TraesCS4B01G089700.1	Wheat	nucleus	36.67	27.71
Os11t0243300-01	Rice	cytosol, mitochondrion, nucleus, plastid	38.33	27.58
TraesCS4A01G226800.1	Wheat	nucleus	36.67	27.43
Bra025644.1-P	Field mustard	nucleus	28.67	27.13
HORVU4Hr1G015250.6	Barley	nucleus, plastid	36.67	26.19
Os12t0208900-00	Rice	nucleus	19.33	26.13
Zm00001d049000_P001	Maize	plastid	36.33	25.95
Bra025363.1-P	Field mustard	nucleus	28.0	24.42
Bra039615.1-P	Field mustard	cytosol	14.33	23.76
Bra027455.1-P	Field mustard	nucleus	22.0	23.0

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.3.13	EnsemblPlantsGene:Bra026589	EnsemblPlants:Bra026589.1	EnsemblPlants:Bra026589.1-P	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0019748	GO:GO:0019760	GO:GO:0043565	InterPro:Homeobox-like_sf	InterPro:Homeodomain_ZF_HD	InterPro:IPR006456
UniProt:M4ECS9	PFAM:PD125774	PFAM:PF04770	PFscan:PS51523	PANTHER:PTHR31948	PANTHER:PTHR31948:SF19
SUPFAM:SSF46689	TIGRFAMs:TIGR01565	TIGRFAMs:TIGR01566	UniParc:UPI00025468B7	InterPro:ZF_HD_homeobox_Cys/His_dimer	SEG:seg

Description

AT2G02540 (E=4e-093) ATHB21, ZFHD4 | ATHB21 (ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 21); DNA binding / transcription activator/ transcription factor

Coordinates

chrA02:-:20469366..20470268

Molecular Weight (calculated)

34175.0 Da

IEP (calculated)

8.233

GRAVY (calculated)

-1.083

Length

300 amino acids

Sequence
(BLAST)

001: MEVASQEEHD MPIPINTTHG GHGHMIHRHH DHRHHNPANS THPNPLMVLS NGNGFGQNHD DPDHHNVGYN IMISNNNNKE KHVVNKYKEC LKNHAASTGG
101: HAIDGCGEFM PSGEEGSIEA LTCSACNCHR NFHRREIEGE DKTYFSPYHH NQPQRNPMFH HHHKMTKSPL PQQMIMPLGV ATTTVSNTES EEDLPFQQPP
201: PPYNHGGHNQ KKRFRTKFTQ EQKEKMLSFA ERIGWKMQRQ EESVVQKFCQ EIGVRRRVLK VWIHNNKHNL SKKSNNNNVE ISAGNNDINK ALAGNLAPSS

Best Arabidopsis Sequence Match ( AT2G02540.1 )
(BLAST)

001: MEIASQEDPI PINTSYGNSG GGHGNMNHHH HANSAPSSLN ITTSNPLLVS SNSNGLGKNH DHSHHHHVGY NIMVTNIKKE KPVVIKYKEC LKNHAATMGG
101: NAIDGCGEFM PSGEEGSIEA LTCSVCNCHR NFHRRETEGE EKTFFSPYLN HHQPPPQQRK LMFHHKMIKS PLPQQMIMPI GVTTAGSNSE SEDLMEEEGG
201: GSLTFRQPPP PPSPYSYGHN QKKRFRTKFT QEQKEKMISF AERVGWKIQR QEESVVQQLC QEIGIRRRVL KVWMHNNKQN LSKKSNNVSN NVDLSAGNND
301: ITENLASTNP

Arabidopsis Description

ZHD3Zinc-finger homeodomain protein 3 [Source:UniProtKB/Swiss-Prot;Acc:O64722]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.