Factsheet for Bra010485.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY24844	Canola	nucleus	99.52	99.52
Bra013822.1-P	Field mustard	nucleus	88.1	82.22
AT4G24660.2	Thale cress	nucleus	84.29	76.62
Bra031051.1-P	Field mustard	mitochondrion	20.95	50.0
Bra016538.1-P	Field mustard	mitochondrion	19.52	46.59
Bra025688.1-P	Field mustard	mitochondrion	19.52	46.59
Bra015898.1-P	Field mustard	mitochondrion	19.05	42.55
Bra003791.1-P	Field mustard	mitochondrion	19.52	42.27
Bra025362.1-P	Field mustard	mitochondrion	19.05	40.0
Bra037816.1-P	Field mustard	nucleus	44.76	38.84
Bra039039.1-P	Field mustard	mitochondrion	18.1	38.78
Bra036852.1-P	Field mustard	nucleus	38.1	36.53
Bra031859.1-P	Field mustard	nucleus	45.24	34.93
Bra024382.1-P	Field mustard	nucleus	47.62	34.13
Bra006657.1-P	Field mustard	nucleus	29.05	33.52
Bra007869.1-P	Field mustard	nucleus	36.19	33.04
Bra004399.1-P	Field mustard	nucleus	36.19	32.9
Bra003759.1-P	Field mustard	nucleus	43.81	31.29
Bra008185.1-P	Field mustard	nucleus	43.81	31.29
Bra037224.1-P	Field mustard	nucleus	39.05	30.94
Bra015857.1-P	Field mustard	nucleus	44.29	30.79
Bra026589.1-P	Field mustard	nucleus	42.38	29.67
Bra008712.1-P	Field mustard	cytosol	35.71	28.52
Bra026830.1-P	Field mustard	nucleus	41.9	28.03
Bra026219.1-P	Field mustard	nucleus	40.0	27.1
Bra012882.1-P	Field mustard	nucleus	32.86	26.04
Bra039038.1-P	Field mustard	nucleus	37.14	25.24
Bra025644.1-P	Field mustard	nucleus	36.19	23.97
Bra025363.1-P	Field mustard	nucleus	35.71	21.8
Bra039615.1-P	Field mustard	cytosol	17.62	20.44
Bra027455.1-P	Field mustard	nucleus	27.14	19.86

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.3.13	EnsemblPlantsGene:Bra010485	EnsemblPlants:Bra010485.1	EnsemblPlants:Bra010485.1-P	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	InterPro:Homeobox-like_sf	InterPro:Homeodomain_ZF_HD	InterPro:IPR006456
UniProt:M4D1Y5	PFAM:PD125774	PFAM:PF04770	PFscan:PS51523	PANTHER:PTHR31948	PANTHER:PTHR31948:SF5
SUPFAM:SSF46689	TIGRFAMs:TIGR01565	TIGRFAMs:TIGR01566	UniParc:UPI0002545C2D	InterPro:ZF_HD_homeobox_Cys/His_dimer	SEG:seg

Description

AT4G24660 (E=1e-038) ATHB22, MEE68 | ATHB22 (HOMEOBOX PROTEIN 22); DNA binding / transcription factor

Coordinates

chrA08:+:14774083..14774715

Molecular Weight (calculated)

23188.2 Da

IEP (calculated)

7.782

GRAVY (calculated)

-0.861

Length

210 amino acids

Sequence
(BLAST)

001: MNFEEQEEEM EMSGVHPSGG YDSLSGEGAT SSGGGGGGRR TSVGEKTRYR ECLKNHAVNI AGHAVDGCCE FMHSGEDGSL DALKCAACCC HRNFHRKETE
101: MISGRAHIVP TYFNRPPQLP PPGYRQPAAS ADEEDTSNPS SSGGTKAKRF RTKFTAEQKE KMFAFAERLG WRMQKHDDVA VEQFCGETGI RRQVIKIWMH
201: NNKNSLGKKP

Best Arabidopsis Sequence Match ( AT4G24660.1 )
(BLAST)

001: MNFEDQEEDM EMSGVNPPCG YDSLSGEGAT SSGGGGVGRS KGVGAKIRYR ECLKNHAVNI GGHAVDGCCE FMPSGEDGTL DALKCAACGC HRNFHRKETE
101: SIGGRAHRVP TYYNRPPQPH QPPGYLHLTS PAAPYRPPAA SGDEEDTSNP SSSGGTTKRF RTKFTAEQKE KMLAFAERLG WRIQKHDDVA VEQFCAETGV
201: RRQVLKIWMH NNKNSLGKKP

Arabidopsis Description

ATHB22homeobox protein 22 [Source:TAIR;Acc:AT4G24660]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.