Factsheet for Bra003759.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX68137	Canola	nucleus	98.3	97.31
CDX85886	Canola	nucleus	91.5	91.5
Bra008185.1-P	Field mustard	nucleus	83.33	83.33
Bra015857.1-P	Field mustard	nucleus	83.33	81.13
Bra031051.1-P	Field mustard	mitochondrion	13.95	46.59
Bra016538.1-P	Field mustard	mitochondrion	13.27	44.32
Bra010485.1-P	Field mustard	nucleus	31.29	43.81
Bra025688.1-P	Field mustard	mitochondrion	12.93	43.18
Bra013822.1-P	Field mustard	nucleus	32.65	42.67
Bra015898.1-P	Field mustard	mitochondrion	13.61	42.55
Bra039039.1-P	Field mustard	mitochondrion	13.61	40.82
Bra003791.1-P	Field mustard	mitochondrion	13.27	40.21
Bra025362.1-P	Field mustard	mitochondrion	13.61	40.0
PGSC0003DMT400009581	Potato	nucleus	36.73	38.03
Solyc04g080490.2.1	Tomato	nucleus	37.07	37.59
Bra037224.1-P	Field mustard	nucleus	33.33	36.98
Bra036852.1-P	Field mustard	nucleus	27.21	36.53
Bra037816.1-P	Field mustard	nucleus	29.93	36.36
Bra006657.1-P	Field mustard	nucleus	21.77	35.16
TraesCS1A01G418600.1	Wheat	nucleus	26.87	35.11
Bra031859.1-P	Field mustard	nucleus	31.29	33.82
Zm00001d009674_P001	Maize	nucleus	26.87	33.05
Bra007869.1-P	Field mustard	nucleus	25.85	33.04
Os05t0579300-01	Rice	nucleus	28.57	32.94
VIT_18s0001g12580.t01	Wine grape	nucleus	35.37	32.91
Bra004399.1-P	Field mustard	nucleus	25.85	32.9
HORVU1Hr1G091470.1	Barley	nucleus	26.19	32.77
TraesCS1B01G448600.1	Wheat	nucleus	27.89	32.54
Bra026589.1-P	Field mustard	nucleus	32.31	31.67
TraesCS1D01G426300.1	Wheat	nucleus	26.87	31.6
TraesCS3B01G258400.1	Wheat	nucleus	24.83	31.47
Bra024382.1-P	Field mustard	nucleus	30.95	31.06
Os01t0635550-00	Rice	nucleus	24.49	31.03
GSMUA_Achr2P23010_001	Banana	nucleus	30.61	30.93
TraesCS3A01G226100.1	Wheat	nucleus	24.49	30.64
TraesCS3D01G224100.1	Wheat	nucleus	24.49	30.51
Bra026830.1-P	Field mustard	nucleus	32.31	30.25
GSMUA_Achr10P...	Banana	nucleus	27.21	30.19
Bra026219.1-P	Field mustard	nucleus	31.63	30.0
Bra008712.1-P	Field mustard	cytosol	26.19	29.28
GSMUA_Achr3P31090_001	Banana	nucleus	27.55	28.62
Bra039038.1-P	Field mustard	nucleus	29.59	28.16
Bra025644.1-P	Field mustard	nucleus	29.25	27.13
Bra039615.1-P	Field mustard	cytosol	16.67	27.07
GSMUA_Achr4P14910_001	Banana	nucleus	30.27	26.97
GSMUA_Achr8P27010_001	Banana	nucleus	29.25	26.79
Bra012882.1-P	Field mustard	nucleus	23.81	26.42
GSMUA_Achr4P07850_001	Banana	nucleus	29.25	25.98
GSMUA_Achr7P25600_001	Banana	nucleus	30.27	25.65
Bra025363.1-P	Field mustard	nucleus	28.91	24.71
Bra027455.1-P	Field mustard	nucleus	23.81	24.39
GSMUA_Achr6P24230_001	Banana	nucleus	18.37	24.22
GSMUA_Achr3P19060_001	Banana	nucleus	18.37	22.5
OQU78488	Sorghum	plastid	28.23	22.25
GSMUA_Achr6P27240_001	Banana	plastid	28.91	22.14
GSMUA_Achr6P22120_001	Banana	nucleus	29.25	21.61
KXG30914	Sorghum	nucleus	28.23	20.44
Zm00001d017784_P001	Maize	nucleus	28.91	20.38
Os02t0706600-00	Rice	nucleus	29.25	20.14
Zm00001d051573_P001	Maize	nucleus	28.23	18.61
TraesCS6B01G301000.1	Wheat	nucleus	28.23	18.0
TraesCS6A01G273700.1	Wheat	nucleus	27.89	17.63
TraesCS6D01G253700.1	Wheat	nucleus	27.89	17.63
HORVU6Hr1G069090.1	Barley	nucleus	26.19	16.7
HORVU6Hr1G069070.1	Barley	plastid	10.2	10.68

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.3.13	EnsemblPlantsGene:Bra003759	EnsemblPlants:Bra003759.1	EnsemblPlants:Bra003759.1-P	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	InterPro:Homeobox-like_sf	InterPro:Homeodomain_ZF_HD	InterPro:IPR006456
UniProt:M4CHS6	PFAM:PD125774	PFAM:PF04770	PFscan:PS51523	PANTHER:PTHR31948	PANTHER:PTHR31948:SF43
SUPFAM:SSF46689	TIGRFAMs:TIGR01565	TIGRFAMs:TIGR01566	UniParc:UPI00025415D4	InterPro:ZF_HD_homeobox_Cys/His_dimer	SEG:seg

Description

AT1G75240 (E=2e-094) AtHB33 | AtHB33 (ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 33); DNA binding / transcription factor

Coordinates

chrA07:-:14933346..14934230

Molecular Weight (calculated)

32478.0 Da

IEP (calculated)

8.676

GRAVY (calculated)

-1.008

Length

294 amino acids

Sequence
(BLAST)

001: MDMRSHEMIE RRRDDNGNNG VGNINSIITN EDNCNGNNNT RVSSNSQTLV PHQSKSSPSF SISTVRYREC LKNHAASVGG SVYDGCGEFM PSGEEGTLEA
101: LRCAACDCHR NFHRKENDGV GSSDGSSHHR HHHHHHQYGG GRRPPPRNMM LNPLMLPPPP SYAPLHHHKY GMSPPGGGGM VTPMSFPYGG GGGGAESSSE
201: DLNMYGQSSG ENGGGVTPGQ TAFSMKRFRT KFTAEQKEKM MEFAEKLGWR MNKQDEEDLK RFCGEIGVKR QVFKVWMHNN KNNARKQPTP TTTT

Best Arabidopsis Sequence Match ( AT1G75240.1 )
(BLAST)

001: MDMRSHEMIE RRREDNGNNN GGVVISNIIS TNIDDNCNGN NNNTRVSCNS QTLDHHQSKS PSSFSISAAA KPTVRYRECL KNHAASVGGS VHDGCGEFMP
101: SGEEGTIEAL RCAACDCHRN FHRKEMDGVG SSDLISHHRH HHYHHNQYGG GGGRRPPPPN MMLNPLMLPP PPNYQPIHHH KYGMSPPGGG GMVTPMSVAY
201: GGGGGGAESS SEDLNLYGQS SGEGAGAAAG QMAFSMSSSK KRFRTKFTTD QKERMMDFAE KLGWRMNKQD EEELKRFCGE IGVKRQVFKV WMHNNKNNAK
301: KPPTPTTTL

Arabidopsis Description

ZHD5ZHD5 [Source:UniProtKB/TrEMBL;Acc:A0A178WFZ4]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.