Factsheet for Os02t0706600-00

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
Os01t0635550-00
Os02t0706600-00
Os05t0579300-01
Os08t0438400-01
Os08t0479400-01
Os09t0414600-02
Os09t0466400-01
Os11t0243300-01
Os12t0208900-00

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G75240.1	Os11t0243300-01	AT1G14440.1	16428600
AT1G75240.1	Os12t0208900-00	AT1G14440.1	16428600
AT1G75240.1	Os01t0635550-00	AT1G75240.1	16428600
AT1G75240.1	Os02t0706600-00	AT1G75240.1	16428600
AT1G75240.1	Os05t0579300-01	AT1G75240.1	16428600
AT1G75240.1	Os01t0635550-00	AT3G50890.1	16428600
AT1G75240.1	Os02t0706600-00	AT3G50890.1	16428600
AT1G75240.1	Os05t0579300-01	AT3G50890.1	16428600
AT1G75240.1	Os08t0438400-01	AT5G15210.1	16428600
AT1G75240.1	Os09t0414600-02	AT5G15210.1	16428600
AT1G75240.1	Os08t0479400-01	AT5G65410.1	16428600
AT1G75240.1	Os09t0466400-01	AT5G65410.1	16428600
AT2G18350.1	Os11t0243300-01	AT1G14440.1	16428600
AT2G18350.1	Os12t0208900-00	AT1G14440.1	16428600
AT2G18350.1	Os08t0479400-01	AT5G65410.1	16428600
AT2G18350.1	Os09t0466400-01	AT5G65410.1	16428600
AT3G50890.1	Os11t0243300-01	AT1G14440.1	16428600
AT3G50890.1	Os12t0208900-00	AT1G14440.1	16428600
AT3G50890.1	Os01t0635550-00	AT1G75240.1	16428600
AT3G50890.1	Os02t0706600-00	AT1G75240.1	16428600
AT3G50890.1	Os05t0579300-01	AT1G75240.1	16428600
AT3G50890.1	Os08t0438400-01	AT5G15210.1	16428600
AT3G50890.1	Os09t0414600-02	AT5G15210.1	16428600
AT3G50890.1	Os08t0479400-01	AT5G65410.1	16428600
AT3G50890.1	Os09t0466400-01	AT5G65410.1	16428600

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d017784_P001	Maize	nucleus	62.76	64.27
TraesCS6D01G253700.1	Wheat	nucleus	68.15	62.58
KXG30914	Sorghum	nucleus	59.02	62.07
TraesCS6A01G273700.1	Wheat	nucleus	66.51	61.08
TraesCS6B01G301000.1	Wheat	nucleus	65.57	60.74
Zm00001d051573_P001	Maize	nucleus	63.23	60.54
Os05t0579300-01	Rice	nucleus	26.93	45.1
GSMUA_Achr10P...	Banana	nucleus	26.93	43.4
HORVU6Hr1G069070.1	Barley	plastid	28.1	42.7
Os01t0635550-00	Rice	nucleus	22.95	42.24
GSMUA_Achr2P23010_001	Banana	nucleus	28.57	41.92
Os11t0128300-01	Rice	cytosol, plastid	10.3	41.9
Os12t0124500-01	Rice	cytosol, plastid	10.07	40.95
Os08t0438100-01	Rice	cytosol	8.43	38.71
Os09t0414600-02	Rice	nucleus	9.84	38.53
Os08t0479400-01	Rice	nucleus	24.59	36.21
Bra036852.1-P	Field mustard	nucleus	18.5	36.07
CDX77960	Canola	nucleus	18.5	36.07
Os09t0466400-01	Rice	nucleus	23.18	35.48
CDX73775	Canola	nucleus	17.8	35.35
CDY37252	Canola	nucleus	20.61	33.72
CDY62531	Canola	nucleus	20.61	33.46
PGSC0003DMT400009581	Potato	nucleus	21.55	32.39
AT3G50890.1	Thale cress	nucleus	18.74	32.13
Os04t0434500-00	Rice	nucleus	21.31	32.04
CDY70550	Canola	nucleus	19.2	31.91
CDX90679	Canola	nucleus	17.8	31.28
CDY45419	Canola	nucleus	21.08	31.25
Solyc04g080490.2.1	Tomato	nucleus	21.08	31.03
Bra008185.1-P	Field mustard	nucleus	21.31	30.95
CDY70108	Canola	nucleus	19.2	30.94
CDX73152	Canola	nucleus	21.55	30.77
Bra037224.1-P	Field mustard	nucleus	18.97	30.57
AT2G18350.1	Thale cress	nucleus	18.74	30.53
VIT_18s0001g12580.t01	Wine grape	nucleus	22.48	30.38
CDY28987	Canola	nucleus	17.33	30.2
CDY71124	Canola	nucleus	18.03	29.96
Bra015857.1-P	Field mustard	nucleus	21.08	29.8
CDX68137	Canola	nucleus	20.37	29.29
Bra003759.1-P	Field mustard	nucleus	20.14	29.25
CDX85886	Canola	nucleus	20.14	29.25
KRH76785	Soybean	nucleus	21.55	29.02
AT1G75240.1	Thale cress	nucleus	20.84	28.8
KRH28682	Soybean	nucleus	22.48	28.57
Solyc02g085160.1.1	Tomato	nucleus	19.2	27.99
Os12t0208900-00	Rice	nucleus	14.52	27.93
KRH69909	Soybean	nucleus	21.78	27.84
PGSC0003DMT400009033	Potato	nucleus	19.44	27.48
Os11t0243300-01	Rice	cytosol, mitochondrion, nucleus, plastid	26.46	27.1
KRH08258	Soybean	nucleus	20.61	26.75
Os08t0438400-01	Rice	plastid	20.61	26.04
Os03t0718500-00	Rice	mitochondrion, nucleus, peroxisome	14.29	25.63
Bra012882.1-P	Field mustard	nucleus	15.46	24.91
VIT_04s0023g01880.t01	Wine grape	nucleus	20.14	19.86

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.3.13	EntrezGene:4330466	ProteinID:AAL87169.1	ProteinID:BAD08049.1	ProteinID:BAD08093.1
ProteinID:BAS80524.1	ncoils:Coil	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0046872
InterPro:Homeobox-like_sf	InterPro:Homeobox_dom	InterPro:Homeodomain_ZF_HD	InterPro:IPR001356	InterPro:IPR006456	EnsemblPlantsGene:Os02g0706600
EnsemblPlants:Os02t0706600-00	PFAM:PD125774	PFAM:PF04770	PFscan:PS51523	PANTHER:PTHR31948	PANTHER:PTHR31948:SF11
UniProt:Q8S3Q9	SUPFAM:SSF46689	TIGRFAMs:TIGR01565	TIGRFAMs:TIGR01566	UniParc:UPI00000A30C7	RefSeq:XP_015626824.1
InterPro:ZF_HD_homeobox_Cys/His_dimer	SEG:seg	:	:	:	:

Description

zinc finger homeodomain class homeobox transcription factor 7Similar to zinc finger homeodomain protein 1. (Os02t0706600-00)

Coordinates

chr2:-:29206676..29208686

Molecular Weight (calculated)

45061.4 Da

IEP (calculated)

7.234

GRAVY (calculated)

-0.655

Length

427 amino acids

Sequence
(BLAST)

001: MEYKRSSHVE EEEEEEEEED DEEEDEEEQG HHQYTTAAAQ QQLHPQVLGS SASSPSSLMD SAAFSRPLLP PNLSLVSPSA AAAAAPGGSY LHAAHHHGQG
101: RRVEAPGGES QHHLQRHHEP ARNGVLGGVA GAHAASTLAL VGGGGGGPRG GEGAAGEAPT WRYRECLKNH AARMGAHVLD GCGEFMSSPG DGAAALACAA
201: CGCHRSFHRR EPAVVAPASL SLCPASASAS AAAGLVSLSP SATPTGANSS RLMPLLLAPP HMQKRPPVLP VSPASAPAAL AESSSEELRP PPLPSSHPHA
301: HAAAVVAASA SAPPGPSKKR FRTKFTAEQK ERMREFAHRV GWRIHKPDAA AVDAFCAQVG VSRRVLKVWM HNNKHLAKTP PSPTSQPPPP PLHHDPSPPP
401: PPHHHHHHHH HHHPPQHHQQ QQQQHDA

Best Arabidopsis Sequence Match ( AT1G75240.1 )
(BLAST)

001: MDMRSHEMIE RRREDNGNNN GGVVISNIIS TNIDDNCNGN NNNTRVSCNS QTLDHHQSKS PSSFSISAAA KPTVRYRECL KNHAASVGGS VHDGCGEFMP
101: SGEEGTIEAL RCAACDCHRN FHRKEMDGVG SSDLISHHRH HHYHHNQYGG GGGRRPPPPN MMLNPLMLPP PPNYQPIHHH KYGMSPPGGG GMVTPMSVAY
201: GGGGGGAESS SEDLNLYGQS SGEGAGAAAG QMAFSMSSSK KRFRTKFTTD QKERMMDFAE KLGWRMNKQD EEELKRFCGE IGVKRQVFKV WMHNNKNNAK
301: KPPTPTTTL

Arabidopsis Description

ZHD5ZHD5 [Source:UniProtKB/TrEMBL;Acc:A0A178WFZ4]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.