Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY70550 | Canola | nucleus | 82.06 | 83.66 |
| CDY70108 | Canola | nucleus | 83.59 | 82.64 |
| Bra037224.1-P | Field mustard | nucleus | 82.82 | 81.89 |
| CDY71124 | Canola | nucleus | 67.18 | 68.48 |
| AT3G28917.1 | Thale cress | mitochondrion | 18.32 | 48.0 |
| AT1G18835.1 | Thale cress | mitochondrion | 14.89 | 44.32 |
| AT1G74660.1 | Thale cress | mitochondrion | 16.41 | 42.16 |
| AT4G24660.2 | Thale cress | nucleus | 33.21 | 37.66 |
| AT3G50890.1 | Thale cress | nucleus | 33.21 | 34.94 |
| PGSC0003DMT400009581 | Potato | nucleus | 36.64 | 33.8 |
| Solyc04g080490.2.1 | Tomato | nucleus | 37.02 | 33.45 |
| AT1G75240.1 | Thale cress | nucleus | 38.55 | 32.69 |
| TraesCS1A01G418600.1 | Wheat | nucleus | 27.48 | 32.0 |
| HORVU1Hr1G091470.1 | Barley | nucleus | 28.24 | 31.49 |
| Zm00001d009674_P001 | Maize | nucleus | 28.63 | 31.38 |
| Os01t0635550-00 | Rice | nucleus | 27.48 | 31.03 |
| Os05t0579300-01 | Rice | nucleus | 29.01 | 29.8 |
| TraesCS3B01G258400.1 | Wheat | nucleus | 26.34 | 29.74 |
| VIT_18s0001g12580.t01 | Wine grape | nucleus | 35.5 | 29.43 |
| TraesCS1B01G448600.1 | Wheat | nucleus | 28.24 | 29.37 |
| TraesCS1D01G426300.1 | Wheat | nucleus | 27.86 | 29.2 |
| TraesCS3A01G226100.1 | Wheat | nucleus | 25.95 | 28.94 |
| TraesCS3D01G224100.1 | Wheat | nucleus | 25.95 | 28.81 |
| GSMUA_Achr3P31090_001 | Banana | nucleus | 30.92 | 28.62 |
| AT5G42780.1 | Thale cress | nucleus | 25.95 | 28.1 |
| AT5G65410.1 | Thale cress | nucleus | 29.77 | 27.96 |
| GSMUA_Achr10P... | Banana | nucleus | 28.24 | 27.92 |
| AT1G14440.1 | Thale cress | nucleus | 33.21 | 27.88 |
| AT1G69600.1 | Thale cress | nucleus | 25.57 | 27.69 |
| AT5G15210.1 | Thale cress | nucleus | 27.86 | 26.94 |
| AT5G60480.1 | Thale cress | nucleus | 22.9 | 26.91 |
| GSMUA_Achr2P23010_001 | Banana | nucleus | 29.77 | 26.8 |
| AT2G02540.2 | Thale cress | nucleus | 30.53 | 25.81 |
| GSMUA_Achr8P27010_001 | Banana | nucleus | 30.92 | 25.23 |
| AT3G28920.1 | Thale cress | nucleus | 29.39 | 24.68 |
| GSMUA_Achr7P25600_001 | Banana | nucleus | 32.44 | 24.5 |
| GSMUA_Achr4P14910_001 | Banana | nucleus | 30.53 | 24.24 |
| GSMUA_Achr4P07850_001 | Banana | nucleus | 30.15 | 23.87 |
| AT5G39760.1 | Thale cress | nucleus | 29.77 | 23.35 |
| OQU78488 | Sorghum | plastid | 30.15 | 21.18 |
| GSMUA_Achr6P22120_001 | Banana | nucleus | 31.3 | 20.6 |
| GSMUA_Achr6P27240_001 | Banana | plastid | 30.15 | 20.57 |
| GSMUA_Achr6P24230_001 | Banana | nucleus | 16.79 | 19.73 |
| Os02t0706600-00 | Rice | nucleus | 30.53 | 18.74 |
| KXG30914 | Sorghum | nucleus | 29.01 | 18.72 |
| Zm00001d017784_P001 | Maize | nucleus | 29.39 | 18.47 |
| GSMUA_Achr3P19060_001 | Banana | nucleus | 16.79 | 18.33 |
| Zm00001d051573_P001 | Maize | nucleus | 29.39 | 17.26 |
| TraesCS6B01G301000.1 | Wheat | nucleus | 30.15 | 17.14 |
| TraesCS6A01G273700.1 | Wheat | nucleus | 30.15 | 16.99 |
| TraesCS6D01G253700.1 | Wheat | nucleus | 30.15 | 16.99 |
| HORVU6Hr1G069090.1 | Barley | nucleus | 28.24 | 16.05 |
| HORVU6Hr1G069070.1 | Barley | plastid | 11.83 | 11.03 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.3.13 | EntrezGene:816350 | ProteinID:AAD15502.1 | ProteinID:AEC06760.1 | ArrayExpress:AT2G18350 |
| EnsemblPlantsGene:AT2G18350 | RefSeq:AT2G18350 | TAIR:AT2G18350 | RefSeq:AT2G18350-TAIR-G | EnsemblPlants:AT2G18350.1 | TAIR:AT2G18350.1 |
| EMBL:AY088255 | Symbol:AtHB24 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0042803 | GO:GO:0046872 | InterPro:Homeobox-like_sf | InterPro:Homeodomain_ZF_HD | InterPro:IPR006456 | RefSeq:NP_565436.1 |
| PFAM:PD125774 | PFAM:PF04770 | PO:PO:0000013 | PO:PO:0000014 | PO:PO:0000037 | PO:PO:0000293 |
| PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 |
| PO:PO:0007095 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 |
| PO:PO:0009005 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 |
| PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020038 |
| PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PFscan:PS51523 | PANTHER:PTHR31948 |
| PANTHER:PTHR31948:SF9 | UniProt:Q9ZPW7 | SUPFAM:SSF46689 | TIGRFAMs:TIGR01565 | TIGRFAMs:TIGR01566 | UniParc:UPI00000A26D7 |
| InterPro:ZF_HD_homeobox_Cys/His_dimer | SEG:seg | : | : | : | : |
Description
ZHD6Zinc-finger homeodomain protein 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZPW7]
Coordinates
chr2:-:7971017..7972396
Molecular Weight (calculated)
29952.2 Da
IEP (calculated)
9.218
GRAVY (calculated)
-1.040
Length
262 amino acids
Sequence
(BLAST)
(BLAST)
001: MEVREKKDEK MEMTRRKSSA LDHHRLPPYT YSQTANKEKP TTKRNGSDPD PDPDLDTNPI SISHAPRSYA RPQTTSPGKA RYRECQKNHA ASSGGHVVDG
101: CGEFMSSGEE GTVESLLCAA CDCHRSFHRK EIDGLFVVNF NSFGHSQRPL GSRHVSPIMM SFGGGGGCAA ESSTEDLNKF HQSFSGYGVD QFHHYQPKKR
201: FRTKFNEEQK EKMMEFAEKI GWRMTKLEDD EVNRFCREIK VKRQVFKVWM HNNKQAAKKK DL
101: CGEFMSSGEE GTVESLLCAA CDCHRSFHRK EIDGLFVVNF NSFGHSQRPL GSRHVSPIMM SFGGGGGCAA ESSTEDLNKF HQSFSGYGVD QFHHYQPKKR
201: FRTKFNEEQK EKMMEFAEKI GWRMTKLEDD EVNRFCREIK VKRQVFKVWM HNNKQAAKKK DL
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.