Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY45419 | Canola | nucleus | 82.52 | 88.54 |
| CDY37252 | Canola | nucleus | 74.43 | 88.12 |
| CDY62531 | Canola | nucleus | 74.76 | 87.83 |
| CDX73152 | Canola | nucleus | 84.79 | 87.63 |
| Bra015857.1-P | Field mustard | nucleus | 85.11 | 87.09 |
| Bra008185.1-P | Field mustard | nucleus | 82.52 | 86.73 |
| AT1G18835.1 | Thale cress | mitochondrion | 12.3 | 43.18 |
| AT1G74660.1 | Thale cress | mitochondrion | 13.92 | 42.16 |
| AT3G28917.1 | Thale cress | mitochondrion | 13.27 | 41.0 |
| AT4G24660.2 | Thale cress | nucleus | 29.77 | 39.83 |
| AT2G18350.1 | Thale cress | nucleus | 32.69 | 38.55 |
| PGSC0003DMT400009581 | Potato | nucleus | 34.63 | 37.68 |
| Solyc04g080490.2.1 | Tomato | nucleus | 35.28 | 37.59 |
| TraesCS1A01G418600.1 | Wheat | nucleus | 24.92 | 34.22 |
| AT3G50890.1 | Thale cress | nucleus | 27.51 | 34.14 |
| VIT_18s0001g12580.t01 | Wine grape | nucleus | 34.3 | 33.54 |
| HORVU1Hr1G091470.1 | Barley | nucleus | 24.92 | 32.77 |
| Zm00001d009674_P001 | Maize | nucleus | 24.92 | 32.22 |
| TraesCS1B01G448600.1 | Wheat | nucleus | 26.21 | 32.14 |
| AT5G65410.1 | Thale cress | nucleus | 28.8 | 31.9 |
| AT1G69600.1 | Thale cress | nucleus | 24.92 | 31.82 |
| Os05t0579300-01 | Rice | nucleus | 26.21 | 31.76 |
| AT1G14440.1 | Thale cress | nucleus | 32.04 | 31.73 |
| TraesCS1D01G426300.1 | Wheat | nucleus | 25.24 | 31.2 |
| Os01t0635550-00 | Rice | nucleus | 23.3 | 31.03 |
| AT2G02540.2 | Thale cress | nucleus | 31.07 | 30.97 |
| GSMUA_Achr2P23010_001 | Banana | nucleus | 28.48 | 30.24 |
| AT5G60480.1 | Thale cress | nucleus | 21.68 | 30.04 |
| TraesCS3B01G258400.1 | Wheat | nucleus | 22.33 | 29.74 |
| AT5G15210.1 | Thale cress | nucleus | 25.89 | 29.52 |
| GSMUA_Achr10P... | Banana | nucleus | 25.24 | 29.43 |
| TraesCS3A01G226100.1 | Wheat | nucleus | 22.33 | 29.36 |
| TraesCS3D01G224100.1 | Wheat | nucleus | 22.33 | 29.24 |
| AT3G28920.1 | Thale cress | nucleus | 28.48 | 28.21 |
| AT5G42780.1 | Thale cress | nucleus | 22.01 | 28.1 |
| GSMUA_Achr3P31090_001 | Banana | nucleus | 25.24 | 27.56 |
| GSMUA_Achr8P27010_001 | Banana | nucleus | 28.48 | 27.41 |
| GSMUA_Achr4P14910_001 | Banana | nucleus | 27.51 | 25.76 |
| GSMUA_Achr4P07850_001 | Banana | nucleus | 27.18 | 25.38 |
| GSMUA_Achr7P25600_001 | Banana | nucleus | 28.16 | 25.07 |
| AT5G39760.1 | Thale cress | nucleus | 26.86 | 24.85 |
| GSMUA_Achr6P24230_001 | Banana | nucleus | 17.48 | 24.22 |
| GSMUA_Achr6P27240_001 | Banana | plastid | 27.51 | 22.14 |
| GSMUA_Achr3P19060_001 | Banana | nucleus | 17.15 | 22.08 |
| OQU78488 | Sorghum | plastid | 26.54 | 21.98 |
| GSMUA_Achr6P22120_001 | Banana | nucleus | 27.51 | 21.36 |
| Os02t0706600-00 | Rice | nucleus | 28.8 | 20.84 |
| KXG30914 | Sorghum | nucleus | 26.86 | 20.44 |
| Zm00001d017784_P001 | Maize | nucleus | 27.18 | 20.14 |
| TraesCS6B01G301000.1 | Wheat | nucleus | 27.83 | 18.66 |
| Zm00001d051573_P001 | Maize | nucleus | 26.86 | 18.61 |
| TraesCS6A01G273700.1 | Wheat | nucleus | 27.83 | 18.49 |
| TraesCS6D01G253700.1 | Wheat | nucleus | 27.83 | 18.49 |
| HORVU6Hr1G069090.1 | Barley | nucleus | 25.89 | 17.35 |
| HORVU6Hr1G069070.1 | Barley | plastid | 10.36 | 11.39 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.3.13 | EntrezGene:843861 | UniProt:A0A178WFZ4 | ProteinID:AAG12686.1 | ProteinID:AEE35692.1 |
| EMBL:AK229038 | ArrayExpress:AT1G75240 | EnsemblPlantsGene:AT1G75240 | RefSeq:AT1G75240 | TAIR:AT1G75240 | RefSeq:AT1G75240-TAIR-G |
| EnsemblPlants:AT1G75240.1 | TAIR:AT1G75240.1 | EMBL:AY084462 | Unigene:At.34802 | Symbol:AtHB33 | EMBL:BT028894 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 |
| GO:GO:0006355 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009719 | GO:GO:0009737 | GO:GO:0009738 | GO:GO:0009987 | GO:GO:0042803 | GO:GO:0043565 |
| GO:GO:0045893 | GO:GO:0046872 | InterPro:Homeobox-like_sf | InterPro:Homeodomain_ZF_HD | InterPro:IPR006456 | RefSeq:NP_565106.1 |
| ProteinID:OAP17277.1 | PFAM:PD125774 | PFAM:PF04770 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000293 |
| PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 |
| PO:PO:0007115 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009006 | PO:PO:0009009 |
| PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 |
| PO:PO:0009046 | PO:PO:0009052 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0025022 | PFscan:PS51523 |
| PANTHER:PTHR31948 | PANTHER:PTHR31948:SF43 | UniProt:Q9FRL5 | SUPFAM:SSF46689 | TIGRFAMs:TIGR01565 | TIGRFAMs:TIGR01566 |
| UniParc:UPI000005EB2D | InterPro:ZF_HD_homeobox_Cys/His_dimer | SEG:seg | : | : | : |
Description
ZHD5ZHD5 [Source:UniProtKB/TrEMBL;Acc:A0A178WFZ4]
Coordinates
chr1:+:28241011..28242795
Molecular Weight (calculated)
33894.8 Da
IEP (calculated)
8.577
GRAVY (calculated)
-0.890
Length
309 amino acids
Sequence
(BLAST)
(BLAST)
001: MDMRSHEMIE RRREDNGNNN GGVVISNIIS TNIDDNCNGN NNNTRVSCNS QTLDHHQSKS PSSFSISAAA KPTVRYRECL KNHAASVGGS VHDGCGEFMP
101: SGEEGTIEAL RCAACDCHRN FHRKEMDGVG SSDLISHHRH HHYHHNQYGG GGGRRPPPPN MMLNPLMLPP PPNYQPIHHH KYGMSPPGGG GMVTPMSVAY
201: GGGGGGAESS SEDLNLYGQS SGEGAGAAAG QMAFSMSSSK KRFRTKFTTD QKERMMDFAE KLGWRMNKQD EEELKRFCGE IGVKRQVFKV WMHNNKNNAK
301: KPPTPTTTL
101: SGEEGTIEAL RCAACDCHRN FHRKEMDGVG SSDLISHHRH HHYHHNQYGG GGGRRPPPPN MMLNPLMLPP PPNYQPIHHH KYGMSPPGGG GMVTPMSVAY
201: GGGGGGAESS SEDLNLYGQS SGEGAGAAAG QMAFSMSSSK KRFRTKFTTD QKERMMDFAE KLGWRMNKQD EEELKRFCGE IGVKRQVFKV WMHNNKNNAK
301: KPPTPTTTL
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.