Factsheet for AT1G74660.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
mitochondrion 5
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX85849	Canola	mitochondrion	88.24	92.78
CDX68172	Canola	mitochondrion	88.24	92.78
Bra003791.1-P	Field mustard	mitochondrion	88.24	92.78
CDX73105	Canola	mitochondrion	84.31	91.49
CDX96558	Canola	mitochondrion	81.37	88.3
Bra015898.1-P	Field mustard	mitochondrion	81.37	88.3
AT1G18835.1	Thale cress	mitochondrion	75.49	87.5
AT3G28917.1	Thale cress	mitochondrion	57.84	59.0
GSMUA_AchrUn_...	Banana	cytosol	48.04	52.69
Os08t0438100-01	Rice	cytosol	41.18	45.16
TraesCS5D01G234700.1	Wheat	mitochondrion	40.2	44.09
TraesCS5B01G226000.1	Wheat	mitochondrion	40.2	44.09
TraesCS5A01G227200.1	Wheat	mitochondrion	40.2	44.09
GSMUA_Achr6P30650_001	Banana	mitochondrion	40.2	43.16
Zm00001d032177_P001	Maize	mitochondrion	46.08	39.5
Zm00001d020459_P001	Maize	mitochondrion	40.2	36.94
KXG35630	Sorghum	nucleus	38.24	35.45
KXG25227	Sorghum	mitochondrion	44.12	35.43
Zm00001d050452_P001	Maize	mitochondrion	43.14	34.65
AT4G24660.2	Thale cress	nucleus	44.12	19.48
AT3G50890.1	Thale cress	nucleus	41.18	16.87
AT5G65410.1	Thale cress	nucleus	46.08	16.85
AT2G18350.1	Thale cress	nucleus	42.16	16.41
AT1G69600.1	Thale cress	nucleus	36.27	15.29
AT5G42780.1	Thale cress	nucleus	34.31	14.46
AT1G75240.1	Thale cress	nucleus	42.16	13.92
AT5G60480.1	Thale cress	nucleus	29.41	13.45
AT5G15210.1	Thale cress	nucleus	35.29	13.28
AT2G02540.2	Thale cress	nucleus	40.2	13.23
AT1G14440.1	Thale cress	nucleus	40.2	13.14
AT3G28920.1	Thale cress	nucleus	40.2	13.14
AT5G39760.1	Thale cress	nucleus	38.24	11.68

Protein Annotations

MapMan:15.5.3.13	EntrezGene:843805	UniProt:A0A178WD69	ProteinID:AAG52375.1	ProteinID:AEE35619.1	ArrayExpress:AT1G74660
EnsemblPlantsGene:AT1G74660	RefSeq:AT1G74660	TAIR:AT1G74660	RefSeq:AT1G74660-TAIR-G	EnsemblPlants:AT1G74660.1	TAIR:AT1G74660.1
EMBL:AY085327	EMBL:BT024806	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005737
GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009628	GO:GO:0009640	GO:GO:0009719	GO:GO:0009733	GO:GO:0009735
GO:GO:0009737	GO:GO:0009739	GO:GO:0009741	GO:GO:0009791	GO:GO:0009987	GO:GO:0042803
GO:GO:0043392	GO:GO:0045892	GO:GO:0046872	GO:GO:0048509	InterPro:IPR006456	Symbol:MIF1
RefSeq:NP_565088.1	ProteinID:OAP16064.1	PFAM:PD125774	PFAM:PF04770	PO:PO:0000230	PO:PO:0000293
PO:PO:0007131	PO:PO:0007611	PO:PO:0007616	PO:PO:0009001	PO:PO:0009005	PO:PO:0009025
PO:PO:0009032	PO:PO:0009046	PO:PO:0009047	PO:PO:0020100	PFscan:PS51523	PANTHER:PTHR31948
PANTHER:PTHR31948:SF7	UniProt:Q9CA51	TIGRFAMs:TIGR01566	UniParc:UPI00000AA424	InterPro:ZF_HD_homeobox_Cys/His_dimer	SEG:seg

Description

MIF1Mini zinc finger protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9CA51]

Coordinates

chr1:-:28047252..28048186

Molecular Weight (calculated)

11213.1 Da

IEP (calculated)

8.380

GRAVY (calculated)

-0.602

Length

102 amino acids

Sequence
(BLAST)

001: MMKKRQMVIK QRSRNSNTSS SWTTTSSSSS SSEISNVRYV ECQKNHAANI GGYAVDGCRE FMAAGVEGTV DALRCAACGC HRNFHRKEVD TEVVCEYSPP
101: NA

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.