Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX69541 | Canola | nucleus | 76.75 | 79.09 |
| Bra008712.1-P | Field mustard | cytosol | 76.75 | 79.09 |
| CDX85059 | Canola | nucleus | 68.63 | 78.15 |
| Os09t0414600-02 | Rice | nucleus | 19.56 | 48.62 |
| AT5G39760.1 | Thale cress | nucleus | 59.04 | 47.9 |
| AT3G28920.1 | Thale cress | nucleus | 54.98 | 47.76 |
| GSMUA_Achr6P02700_001 | Banana | nucleus | 39.11 | 44.54 |
| AT1G18835.1 | Thale cress | mitochondrion | 14.39 | 44.32 |
| VIT_01s0026g02460.t01 | Wine grape | nucleus | 36.16 | 42.61 |
| AT1G69600.1 | Thale cress | nucleus | 38.01 | 42.56 |
| PGSC0003DMT400080288 | Potato | nucleus | 45.02 | 42.51 |
| AT5G60480.1 | Thale cress | nucleus | 34.69 | 42.15 |
| KRH74865 | Soybean | nucleus | 44.28 | 40.54 |
| Solyc05g007580.1.1 | Tomato | nucleus | 44.28 | 40.4 |
| KRH70724 | Soybean | nucleus | 43.17 | 40.21 |
| GSMUA_Achr10P... | Banana | nucleus | 38.38 | 39.85 |
| KRG89637 | Soybean | nucleus | 24.35 | 36.26 |
| AT3G28917.1 | Thale cress | mitochondrion | 13.28 | 36.0 |
| AT4G24660.2 | Thale cress | nucleus | 30.26 | 35.5 |
| AT1G74660.1 | Thale cress | mitochondrion | 13.28 | 35.29 |
| Os08t0438400-01 | Rice | plastid | 42.8 | 34.32 |
| TraesCS3A01G308700.1 | Wheat | nucleus | 23.25 | 34.05 |
| TraesCS1D01G064300.1 | Wheat | mitochondrion | 21.4 | 33.53 |
| AT3G50890.1 | Thale cress | nucleus | 30.63 | 33.33 |
| HORVU1Hr1G013140.1 | Barley | cytosol | 9.23 | 33.33 |
| KRH50585 | Soybean | nucleus | 42.07 | 31.84 |
| Zm00001d005757_P001 | Maize | nucleus | 41.33 | 31.02 |
| AT5G65410.1 | Thale cress | nucleus | 31.0 | 30.11 |
| Zm00001d032175_P001 | Maize | cytosol | 41.33 | 30.03 |
| Zm00001d020460_P001 | Maize | nucleus | 40.59 | 29.73 |
| KXG35632 | Sorghum | nucleus | 40.96 | 29.13 |
| Zm00001d050443_P001 | Maize | nucleus | 39.11 | 28.96 |
| EES15050 | Sorghum | cytosol | 40.59 | 28.21 |
| AT2G18350.1 | Thale cress | nucleus | 26.94 | 27.86 |
| HORVU5Hr1G065740.1 | Barley | nucleus | 39.48 | 27.72 |
| OQU86730 | Sorghum | nucleus | 26.94 | 27.55 |
| TraesCS5A01G227100.1 | Wheat | nucleus | 38.75 | 27.42 |
| TraesCS5D01G234600.1 | Wheat | nucleus | 38.75 | 27.13 |
| TraesCS5B01G225700.1 | Wheat | nucleus | 38.75 | 26.92 |
| AT2G02540.2 | Thale cress | nucleus | 30.63 | 26.77 |
| AT1G14440.1 | Thale cress | nucleus | 30.63 | 26.6 |
| TraesCS1B01G106800.1 | Wheat | nucleus | 28.04 | 26.21 |
| AT5G42780.1 | Thale cress | nucleus | 23.25 | 26.03 |
| AT1G75240.1 | Thale cress | nucleus | 29.52 | 25.89 |
| TraesCS1A01G087700.1 | Wheat | nucleus | 27.31 | 25.87 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.3.13 | EntrezGene:831373 | UniProt:A0A178UMR3 | ProteinID:AED92130.1 | ArrayExpress:AT5G15210 |
| EnsemblPlantsGene:AT5G15210 | RefSeq:AT5G15210 | TAIR:AT5G15210 | RefSeq:AT5G15210-TAIR-G | EnsemblPlants:AT5G15210.1 | TAIR:AT5G15210.1 |
| Symbol:ATHB30 | EMBL:BT012195 | ProteinID:CAB89331.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0019748 | GO:GO:0019760 | GO:GO:0042803 | GO:GO:0043565 | GO:GO:0044212 |
| GO:GO:0046872 | InterPro:Homeobox-like_sf | InterPro:Homeodomain_ZF_HD | InterPro:IPR006456 | RefSeq:NP_197025.1 | ProteinID:OAO93961.1 |
| PFAM:PD125774 | PFAM:PF04770 | PO:PO:0000013 | PO:PO:0000014 | PO:PO:0000037 | PO:PO:0000293 |
| PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007098 |
| PO:PO:0007115 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009006 | PO:PO:0009009 |
| PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 |
| PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0025022 |
| PFscan:PS51523 | PANTHER:PTHR31948 | PANTHER:PTHR31948:SF29 | UniProt:Q9LXG0 | SUPFAM:SSF46689 | TIGRFAMs:TIGR01565 |
| TIGRFAMs:TIGR01566 | UniParc:UPI00000A6D76 | InterPro:ZF_HD_homeobox_Cys/His_dimer | SEG:seg | : | : |
Description
ZHD8Zinc-finger homeodomain protein 8 [Source:UniProtKB/Swiss-Prot;Acc:Q9LXG0]
Coordinates
chr5:-:4937465..4939207
Molecular Weight (calculated)
29383.8 Da
IEP (calculated)
8.906
GRAVY (calculated)
-0.478
Length
271 amino acids
Sequence
(BLAST)
(BLAST)
001: MDVIATTTTI VSDLDSRQPE IEAPIRIQPA KPISFSNGKR CHHHHLASEA VAVATYKECL KNHAAGIGGH ALDGCGEFMP SPSFNSNDPA SLTCAACGCH
101: RNFHRREEDP SSLSAIVPAI EFRPHNRHQL PPPPPPHLAG IRSPDDDDSA SPPPISSSYM LLALSGGRGG ANTAVPMSRK RFRTKFSQYQ KEKMFEFSER
201: VGWRMPKADD VVVKEFCREI GVDKSVFKVW MHNNKISGRS GARRANGGVV VGGVGDSRQS VVPTNGSFSS T
101: RNFHRREEDP SSLSAIVPAI EFRPHNRHQL PPPPPPHLAG IRSPDDDDSA SPPPISSSYM LLALSGGRGG ANTAVPMSRK RFRTKFSQYQ KEKMFEFSER
201: VGWRMPKADD VVVKEFCREI GVDKSVFKVW MHNNKISGRS GARRANGGVV VGGVGDSRQS VVPTNGSFSS T
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.