Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1D01G064300.1 | Wheat | mitochondrion | 62.67 | 27.17 |
| TraesCS3A01G308700.1 | Wheat | nucleus | 60.0 | 24.32 |
| HORVU5Hr1G045580.1 | Barley | cytosol | 26.67 | 21.28 |
| HORVU3Hr1G096990.1 | Barley | cytosol | 25.33 | 19.19 |
| TraesCS1A01G087700.1 | Wheat | nucleus | 65.33 | 17.13 |
| TraesCS1B01G106800.1 | Wheat | nucleus | 64.0 | 16.55 |
| KRG89637 | Soybean | nucleus | 36.0 | 14.84 |
| GSMUA_Achr6P02700_001 | Banana | nucleus | 36.0 | 11.34 |
| GSMUA_Achr10P... | Banana | nucleus | 34.67 | 9.96 |
| PGSC0003DMT400080288 | Potato | nucleus | 37.33 | 9.76 |
| Solyc05g007580.1.1 | Tomato | nucleus | 37.33 | 9.43 |
| AT5G15210.1 | Thale cress | nucleus | 33.33 | 9.23 |
| HORVU1Hr1G091470.1 | Barley | nucleus | 28.0 | 8.94 |
| KRH74865 | Soybean | nucleus | 34.67 | 8.78 |
| Bra008712.1-P | Field mustard | cytosol | 30.67 | 8.75 |
| CDX69541 | Canola | nucleus | 30.67 | 8.75 |
| KRH70724 | Soybean | nucleus | 33.33 | 8.59 |
| HORVU2Hr1G075950.1 | Barley | nucleus | 33.33 | 8.56 |
| Zm00001d020460_P001 | Maize | nucleus | 37.33 | 7.57 |
| HORVU5Hr1G065740.1 | Barley | nucleus | 38.67 | 7.51 |
| KXG35632 | Sorghum | nucleus | 37.33 | 7.35 |
| KRH50585 | Soybean | nucleus | 34.67 | 7.26 |
| HORVU4Hr1G008360.1 | Barley | cytosol, mitochondrion, nucleus | 21.33 | 6.67 |
| HORVU5Hr1G069730.1 | Barley | nucleus | 25.33 | 6.29 |
| HORVU4Hr1G015250.6 | Barley | nucleus, plastid | 32.0 | 5.71 |
| HORVU6Hr1G069070.1 | Barley | plastid | 20.0 | 5.34 |
| VIT_01s0026g02460.t01 | Wine grape | nucleus | 14.67 | 4.78 |
| CDX85059 | Canola | nucleus | 14.67 | 4.62 |
| HORVU6Hr1G069090.1 | Barley | nucleus | 26.67 | 4.34 |
Protein Annotations
| EnsemblPlants:HORVU1Hr1G013140.1 | EnsemblPlantsGene:HORVU1Hr1G013140 | InterPro:IPR006456 | InterPro:ZF_HD_homeobox_Cys/His_dimer | PFAM:PD125774 | PFAM:PF04770 |
| PFscan:PS51523 | UniParc:UPI000B482A1A | UniProt:A0A287ENR3 | MapMan:15.5.3.13 | : | : |
Description
No Description!
Coordinates
chrchr1H:-:33708276..33718079
Molecular Weight (calculated)
8231.8 Da
IEP (calculated)
8.104
GRAVY (calculated)
-0.469
Length
75 amino acids
Sequence
(BLAST)
(BLAST)
1: MDVHGFVKKV RQEAMAPAVK GLEYKECVRN HTLSSDGHVV DGCREWMPLG DLNPADASSH KCVHSAVGTA TRRWG
001: MELGGKCNAI TTTTMISTEV KPHTDPEPEA KPESDPSMAL FPIKKENQKP KTRVDQGAKY RECQKNHAAS TGGHVVDGCC EFMAGGEEGT LGALKCAACN
101: CHRSFHRKEV YGHRNSKQDH QLMITPAFYS SNSSYKPRVM HPTGEIGRRT SSSSEDMKKI LSHRNQNVDG KSLMMMMMRK KKRVRTKINE EQKEKMKEFA
201: ERLGWRMQKK DEEEIDKFCR MVNLRRQVFK VWMHNNKQAM KRNNSNISE
101: CHRSFHRKEV YGHRNSKQDH QLMITPAFYS SNSSYKPRVM HPTGEIGRRT SSSSEDMKKI LSHRNQNVDG KSLMMMMMRK KKRVRTKINE EQKEKMKEFA
201: ERLGWRMQKK DEEEIDKFCR MVNLRRQVFK VWMHNNKQAM KRNNSNISE
Arabidopsis Description
ZHD7ZHD7 [Source:UniProtKB/TrEMBL;Acc:A0A178VL56]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.