Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 1
- cytosol 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| HORVU1Hr1G013140.1 | |
| HORVU5Hr1G065740.1 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT2G18196.1 | HORVU1Hr1G013140.1 | AT5G15210.1 | 18974936 |
| AT2G18196.1 | HORVU5Hr1G065740.1 | AT5G15210.1 | 18974936 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4B01G348900.1 | Wheat | plastid | 66.43 | 97.44 |
| TraesCS4D01G343300.1 | Wheat | plastid | 66.08 | 96.92 |
| TraesCS5A01G516900.1 | Wheat | plastid | 66.08 | 96.92 |
| Os03t0120400-01 | Rice | plastid | 57.69 | 85.49 |
| EER92967 | Sorghum | plastid | 55.59 | 81.96 |
| GSMUA_Achr11P... | Banana | cytosol | 37.76 | 81.82 |
| Zm00001d027405_P001 | Maize | plastid | 54.55 | 80.41 |
| VIT_02s0025g03010.t01 | Wine grape | cytosol, mitochondrion | 33.57 | 67.61 |
| PGSC0003DMT400079287 | Potato | cytosol | 22.73 | 67.01 |
| GSMUA_Achr11P... | Banana | cytosol | 41.61 | 64.32 |
| GSMUA_Achr1P00790_001 | Banana | cytosol | 43.71 | 63.78 |
| GSMUA_Achr2P10220_001 | Banana | mitochondrion, plastid | 40.91 | 61.26 |
| CDY13354 | Canola | cytosol | 36.71 | 58.99 |
| CDX67533 | Canola | cytosol | 36.71 | 58.99 |
| Bra028528.1-P | Field mustard | cytosol | 36.71 | 58.99 |
| PGSC0003DMT400079324 | Potato | endoplasmic reticulum | 37.06 | 58.89 |
| KRH34236 | Soybean | cytosol | 36.36 | 58.43 |
| AT2G18196.1 | Thale cress | plastid | 36.01 | 57.87 |
| Solyc08g075880.2.1 | Tomato | endoplasmic reticulum, plastid | 36.01 | 57.54 |
| KRG92555 | Soybean | cytosol | 35.31 | 56.74 |
| CDX99542 | Canola | plastid | 35.31 | 55.49 |
| CDX86861 | Canola | plastid | 35.31 | 55.49 |
| Bra037919.1-P | Field mustard | plastid | 35.31 | 55.49 |
| PGSC0003DMT400012844 | Potato | plastid | 35.66 | 55.43 |
| AT4G10465.1 | Thale cress | plastid | 34.62 | 54.1 |
| CDX85985 | Canola | mitochondrion | 21.33 | 50.83 |
| HORVU3Hr1G049780.1 | Barley | cytosol | 19.58 | 37.09 |
| HORVU5Hr1G069380.2 | Barley | cytosol | 19.58 | 36.84 |
| HORVU5Hr1G057730.1 | Barley | cytosol | 19.23 | 34.16 |
| HORVU3Hr1G072940.2 | Barley | cytosol | 17.13 | 31.21 |
| HORVU6Hr1G066220.1 | Barley | cytosol | 18.88 | 29.19 |
| HORVU4Hr1G017070.3 | Barley | cytosol | 16.43 | 27.65 |
| HORVU7Hr1G080490.1 | Barley | cytosol | 16.43 | 27.17 |
| HORVU7Hr1G090970.1 | Barley | mitochondrion | 14.34 | 25.79 |
| HORVU6Hr1G009000.1 | Barley | cytosol, plastid, vacuole | 16.78 | 21.33 |
| HORVU2Hr1G011060.1 | Barley | nucleus, plastid | 9.09 | 16.77 |
Protein Annotations
| EnsemblPlants:HORVU4Hr1G085090.2 | EnsemblPlantsGene:HORVU4Hr1G085090 | Gene3D:3.30.70.100 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0006810 |
| GO:GO:0008150 | GO:GO:0030001 | GO:GO:0046872 | InterPro:HMA_dom | InterPro:HMA_dom_sf | InterPro:IPR006121 |
| PANTHER:PTHR22814 | PANTHER:PTHR22814:SF141 | PFAM:PF00403 | PFscan:PS50846 | SEG:seg | SUPFAM:SSF55008 |
| UniParc:UPI000B47A1E7 | UniProt:A0A287PYY1 | MapMan:35.1 | : | : | : |
Description
No Description!
Coordinates
chrchr4H:+:630880783..630882527
Molecular Weight (calculated)
32213.0 Da
IEP (calculated)
10.387
GRAVY (calculated)
-0.803
Length
286 amino acids
Sequence
(BLAST)
(BLAST)
001: GRKARLLVSI TAGSPPSRPP PSQPRYHSLP PPPPINHHGD SHRERQQQQR ARSKRSSNAR ESIFSKLAVR AVHSSPSRFR RYKLLPESAV MSVSSVVSSF
101: LYGCFNPAGG RYHHHRAGAY YHSSHPTSAD TLYYNQGGLA GGGRRMGRSS RPLSLQVVEL KVRMCCSGCA RVVKHALTKL RGVDSVEVEV EMEKVTVTGY
201: VERHRVLKEV RRAGKKAEFW PNPDQPLHFT TAKDYFHDQE SFRPSYNYYR HGYNGDKHGH LPEPHRGSDP VSNMFNDDDV NACSVM
101: LYGCFNPAGG RYHHHRAGAY YHSSHPTSAD TLYYNQGGLA GGGRRMGRSS RPLSLQVVEL KVRMCCSGCA RVVKHALTKL RGVDSVEVEV EMEKVTVTGY
201: VERHRVLKEV RRAGKKAEFW PNPDQPLHFT TAKDYFHDQE SFRPSYNYYR HGYNGDKHGH LPEPHRGSDP VSNMFNDDDV NACSVM
001: MGFGSFISTI TYCLFFRYPH KKPKFKSVSH LNHYHTMPMA RPLSLQTIDL KVRMCCSGCE RVVKHAIYKL RGVDSVEVNL EMERVTVVGY VERKKVLKAV
101: RRAGKRAEFW PYPDMPRYFT SSDHYFKDTT REFRESYNYY RHGYNLSDRH GNIHVTNRGD DKMSNFFNDD NVHACSLM
101: RRAGKRAEFW PYPDMPRYFT SSDHYFKDTT REFRESYNYY RHGYNLSDRH GNIHVTNRGD DKMSNFFNDD NVHACSLM
Arabidopsis Description
HIPP30Heavy metal-associated isoprenylated plant protein 30 [Source:UniProtKB/Swiss-Prot;Acc:F4IQG4]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.