Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| PGSC0003DMT400080288 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT2G18196.1 | PGSC0003DMT400080288 | AT5G15210.1 | 18974936 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_02s0025g03010.t01 | Wine grape | cytosol, mitochondrion | 83.51 | 57.04 |
| PGSC0003DMT400079324 | Potato | endoplasmic reticulum | 100.0 | 53.89 |
| Solyc08g075880.2.1 | Tomato | endoplasmic reticulum, plastid | 98.97 | 53.63 |
| GSMUA_Achr11P... | Banana | cytosol | 70.1 | 51.52 |
| PGSC0003DMT400012844 | Potato | plastid | 77.32 | 40.76 |
| AT2G18196.1 | Thale cress | plastid | 74.23 | 40.45 |
| KRH34236 | Soybean | cytosol | 74.23 | 40.45 |
| Bra028528.1-P | Field mustard | cytosol | 73.2 | 39.89 |
| CDX67533 | Canola | cytosol | 73.2 | 39.89 |
| CDY13354 | Canola | cytosol | 73.2 | 39.89 |
| KRG92555 | Soybean | cytosol | 73.2 | 39.89 |
| CDX86861 | Canola | plastid | 70.1 | 37.36 |
| CDX99542 | Canola | plastid | 70.1 | 37.36 |
| PGSC0003DMT400026532 | Potato | cytosol | 41.24 | 37.04 |
| Bra037919.1-P | Field mustard | plastid | 69.07 | 36.81 |
| AT4G10465.1 | Thale cress | plastid | 69.07 | 36.61 |
| GSMUA_Achr11P... | Banana | cytosol | 67.01 | 35.14 |
| CDX85985 | Canola | mitochondrion | 43.3 | 35.0 |
| Os03t0120400-01 | Rice | plastid | 68.04 | 34.2 |
| GSMUA_Achr2P10220_001 | Banana | mitochondrion, plastid | 67.01 | 34.03 |
| EER92967 | Sorghum | plastid | 68.04 | 34.02 |
| GSMUA_Achr1P00790_001 | Banana | cytosol | 68.04 | 33.67 |
| Zm00001d027405_P001 | Maize | plastid | 67.01 | 33.51 |
| TraesCS5A01G516900.1 | Wheat | plastid | 67.01 | 33.33 |
| TraesCS4D01G343300.1 | Wheat | plastid | 67.01 | 33.33 |
| TraesCS4B01G348900.1 | Wheat | plastid | 67.01 | 33.33 |
| Os10t0537400-00 | Rice | cytosol | 56.7 | 29.73 |
| PGSC0003DMT400052612 | Potato | cytosol, mitochondrion, nucleus | 34.02 | 28.7 |
| KXG39011 | Sorghum | cytosol | 56.7 | 26.44 |
| TraesCS1B01G215100.1 | Wheat | cytosol, plastid | 48.45 | 23.86 |
| TraesCS1D01G204100.1 | Wheat | cytosol, plastid | 48.45 | 23.86 |
| PGSC0003DMT400037204 | Potato | cytosol | 34.02 | 23.74 |
| TraesCS1A01G200700.1 | Wheat | cytosol, plastid | 47.42 | 23.59 |
| HORVU4Hr1G085090.2 | Barley | plastid | 67.01 | 22.73 |
| PGSC0003DMT400056666 | Potato | cytosol | 34.02 | 21.71 |
| PGSC0003DMT400043033 | Potato | cytosol | 35.05 | 21.52 |
| PGSC0003DMT400078635 | Potato | cytosol, plastid | 31.96 | 20.95 |
| PGSC0003DMT400056199 | Potato | cytosol | 32.99 | 20.78 |
| PGSC0003DMT400009390 | Potato | cytosol | 31.96 | 19.5 |
| PGSC0003DMT400015350 | Potato | cytosol | 28.87 | 19.05 |
| PGSC0003DMT400015784 | Potato | cytosol | 29.9 | 18.95 |
| PGSC0003DMT400024481 | Potato | cytosol, plastid | 25.77 | 16.67 |
| PGSC0003DMT400024479 | Potato | cytosol, plastid | 25.77 | 16.67 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400079287 | EnsemblPlantsGene:PGSC0003DMG402030861 | PANTHER:PTHR22814 | PANTHER:PTHR22814:SF280 | PGSC:PGSC0003DMG402030861 | UniParc:UPI000296324D |
| UniProt:M1D1K3 | MapMan:35.1 | : | : | : | : |
Description
Metal ion binding protein [Source:PGSC_GENE;Acc:PGSC0003DMG402030861]
Coordinates
chr8:-:48216723..48217289
Molecular Weight (calculated)
11521.4 Da
IEP (calculated)
9.034
GRAVY (calculated)
-0.924
Length
97 amino acids
Sequence
(BLAST)
(BLAST)
1: MEKVTVVGYV DRNRVLKAVR RHGKRAEFWP YPNPPLYFTT SNNYFKDMTS EYRDSYNYWR HGYNVADKHG NLHVTHRGDD KVSNLFNDDN VNACCLM
001: MGFGSFISTI TYCLFFRYPH KKPKFKSVSH LNHYHTMPMA RPLSLQTIDL KVRMCCSGCE RVVKHAIYKL RGVDSVEVNL EMERVTVVGY VERKKVLKAV
101: RRAGKRAEFW PYPDMPRYFT SSDHYFKDTT REFRESYNYY RHGYNLSDRH GNIHVTNRGD DKMSNFFNDD NVHACSLM
101: RRAGKRAEFW PYPDMPRYFT SSDHYFKDTT REFRESYNYY RHGYNLSDRH GNIHVTNRGD DKMSNFFNDD NVHACSLM
Arabidopsis Description
HIPP30Heavy metal-associated isoprenylated plant protein 30 [Source:UniProtKB/Swiss-Prot;Acc:F4IQG4]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.