Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 3
- cytosol 3
- mitochondrion 3
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| GSMUA_Achr10P... | |
| GSMUA_Achr6P02700_001 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT2G18196.1 | GSMUA_Achr10P... | AT5G15210.1 | 18974936 |
| AT2G18196.1 | GSMUA_Achr6P02700_001 | AT5G15210.1 | 18974936 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr11P... | Banana | cytosol | 65.41 | 91.67 |
| VIT_02s0025g03010.t01 | Wine grape | cytosol, mitochondrion | 57.3 | 74.65 |
| GSMUA_Achr1P00790_001 | Banana | cytosol | 75.68 | 71.43 |
| GSMUA_Achr2P10220_001 | Banana | mitochondrion, plastid | 72.97 | 70.68 |
| PGSC0003DMT400079287 | Potato | cytosol | 35.14 | 67.01 |
| Os03t0120400-01 | Rice | plastid | 67.03 | 64.25 |
| TraesCS4B01G348900.1 | Wheat | plastid | 64.86 | 61.54 |
| KRH34236 | Soybean | cytosol | 58.92 | 61.24 |
| TraesCS4D01G343300.1 | Wheat | plastid | 64.32 | 61.03 |
| TraesCS5A01G516900.1 | Wheat | plastid | 64.32 | 61.03 |
| EER92967 | Sorghum | plastid | 62.7 | 59.79 |
| KRG92555 | Soybean | cytosol | 57.3 | 59.55 |
| CDY13354 | Canola | cytosol | 56.76 | 58.99 |
| CDX67533 | Canola | cytosol | 56.76 | 58.99 |
| Bra028528.1-P | Field mustard | cytosol | 56.76 | 58.99 |
| Zm00001d027405_P001 | Maize | plastid | 61.62 | 58.76 |
| PGSC0003DMT400079324 | Potato | endoplasmic reticulum | 56.22 | 57.78 |
| Solyc08g075880.2.1 | Tomato | endoplasmic reticulum, plastid | 55.68 | 57.54 |
| AT2G18196.1 | Thale cress | plastid | 54.59 | 56.74 |
| CDX99542 | Canola | plastid | 55.68 | 56.59 |
| CDX86861 | Canola | plastid | 55.68 | 56.59 |
| Bra037919.1-P | Field mustard | plastid | 55.14 | 56.04 |
| AT4G10465.1 | Thale cress | plastid | 55.14 | 55.74 |
| PGSC0003DMT400012844 | Potato | plastid | 55.14 | 55.43 |
| Os10t0537400-00 | Rice | cytosol | 53.51 | 53.51 |
| CDX85985 | Canola | mitochondrion | 34.05 | 52.5 |
| TraesCS1B01G215100.1 | Wheat | cytosol, plastid | 49.19 | 46.19 |
| TraesCS1A01G200700.1 | Wheat | cytosol, plastid | 48.65 | 46.15 |
| TraesCS1D01G204100.1 | Wheat | cytosol, plastid | 48.65 | 45.69 |
| GSMUA_Achr2P10210_001 | Banana | cytosol | 35.68 | 44.59 |
| KXG39011 | Sorghum | cytosol | 49.73 | 44.23 |
| HORVU4Hr1G085090.2 | Barley | plastid | 64.32 | 41.61 |
| GSMUA_Achr4P01830_001 | Banana | cytosol | 31.89 | 39.6 |
| GSMUA_Achr3P04460_001 | Banana | cytosol | 31.35 | 38.93 |
| GSMUA_Achr3P07890_001 | Banana | cytosol, mitochondrion, plastid | 31.35 | 38.93 |
| GSMUA_Achr3P15460_001 | Banana | cytosol | 28.11 | 37.96 |
| GSMUA_Achr2P07910_001 | Banana | cytosol | 30.81 | 37.75 |
| GSMUA_Achr10P... | Banana | cytosol | 29.73 | 37.67 |
| GSMUA_Achr10P... | Banana | cytosol | 28.65 | 37.59 |
| GSMUA_Achr7P11680_001 | Banana | cytosol | 29.73 | 36.91 |
| GSMUA_Achr7P13900_001 | Banana | cytosol | 29.19 | 36.73 |
| GSMUA_Achr1P12840_001 | Banana | cytosol | 29.19 | 35.76 |
| GSMUA_Achr4P25770_001 | Banana | cytosol, plastid | 28.65 | 34.19 |
| GSMUA_Achr1P02370_001 | Banana | cytosol, plastid | 28.65 | 34.19 |
| GSMUA_Achr6P14470_001 | Banana | cytosol | 26.49 | 34.03 |
| GSMUA_Achr3P27280_001 | Banana | cytosol | 23.24 | 31.16 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr11P21420_001 | EnsemblPlants:GSMUA_Achr11T21420_001 | EnsemblPlantsGene:GSMUA_Achr11G21420_001 | Gene3D:3.30.70.100 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0006810 | GO:GO:0008150 | GO:GO:0030001 | GO:GO:0046872 | InterPro:HMA_dom | InterPro:HMA_dom_sf |
| InterPro:IPR006121 | PANTHER:PTHR22814 | PANTHER:PTHR22814:SF280 | PFAM:PF00403 | PFscan:PS50846 | SUPFAM:SSF55008 |
| UniParc:UPI000296ECDD | UniProt:M0RU72 | MapMan:35.1 | : | : | : |
Description
Putative Copper transport protein ATOX1 homolog [Source:GMGC_GENE;Acc:GSMUA_Achr11G21420_001]
Coordinates
chr11:-:22046100..22046800
Molecular Weight (calculated)
21472.5 Da
IEP (calculated)
9.381
GRAVY (calculated)
-0.752
Length
185 amino acids
Sequence
(BLAST)
(BLAST)
001: MATALGRAMD SLVSIIYYPF GYQRNHRKSY SNSYYYTKEK SNGRKMSKGR PLSLQTVELK VRMCCTGCER VVKHALLKLR GVDSVEVDLE LEKVTVTGYV
101: ERNKVLKEVR RSGKKAEFWP NPDLPLYFTT EKNYFHDEES FRGSYNYWRH GYNGDRHGRV PVPQRGEDAV SNMFNDDDVN ACSVM
101: ERNKVLKEVR RSGKKAEFWP NPDLPLYFTT EKNYFHDEES FRGSYNYWRH GYNGDRHGRV PVPQRGEDAV SNMFNDDDVN ACSVM
001: MSSLIVKSLG SIVSIIARIF FFRRSRPVSN PRTTAHISYF RMSRKRPLSL QTVELKVRMC CTGCVRIVRN AISKLRGVDS VEVDKELGRV RVVGYVDRNK
101: VLKAVRRAGK RAEFSPYPEP PLYFTSTQNY FVDPSKEFKE SYNYYRHGYN GTEQHGNIPV GSRGDDRVSN MFNDDNVNAC RLM
101: VLKAVRRAGK RAEFSPYPEP PLYFTSTQNY FVDPSKEFKE SYNYYRHGYN GTEQHGNIPV GSRGDDRVSN MFNDDNVNAC RLM
Arabidopsis Description
HIPP44Heavy metal-associated isoprenylated plant protein 44 [Source:UniProtKB/Swiss-Prot;Acc:F4JMB8]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.