Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- plastid 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr2P07910_001 | Banana | cytosol | 85.43 | 85.43 |
| VIT_14s0006g01800.t01 | Wine grape | cytosol | 66.23 | 68.49 |
| Solyc02g091300.2.1 | Tomato | cytosol, plastid | 64.9 | 66.22 |
| VIT_01s0011g04700.t01 | Wine grape | cytosol | 64.24 | 65.99 |
| PGSC0003DMT400078635 | Potato | cytosol, plastid | 64.24 | 65.54 |
| KRG90986 | Soybean | cytosol, plastid | 62.91 | 65.07 |
| KRH35768 | Soybean | cytosol, plastid | 62.25 | 64.38 |
| Solyc04g007630.1.1 | Tomato | cytosol | 60.93 | 62.59 |
| PGSC0003DMT400015350 | Potato | cytosol | 60.26 | 61.9 |
| KRG93769 | Soybean | cytosol | 39.07 | 60.82 |
| KRH38224 | Soybean | cytosol | 58.94 | 60.54 |
| KRG93786 | Soybean | cytosol, plastid | 37.75 | 58.76 |
| AT5G17450.1 | Thale cress | cytosol | 56.95 | 57.72 |
| CDY55938 | Canola | cytosol | 56.29 | 57.05 |
| CDX85452 | Canola | cytosol | 56.29 | 57.05 |
| Bra023619.1-P | Field mustard | cytosol | 56.29 | 57.05 |
| KRG93169 | Soybean | cytosol | 54.3 | 56.94 |
| CDY38431 | Canola | cytosol | 55.63 | 56.38 |
| Solyc03g043640.2.1 | Tomato | cytosol | 54.3 | 55.78 |
| Bra013976.1-P | Field mustard | cytosol | 54.97 | 55.7 |
| CDY16919 | Canola | cytosol | 54.97 | 55.7 |
| KRH76245 | Soybean | cytosol | 32.45 | 55.68 |
| KRH01671 | Soybean | cytosol | 52.32 | 54.48 |
| GSMUA_Achr4P01830_001 | Banana | cytosol | 53.64 | 54.36 |
| KRH15973 | Soybean | cytosol, plastid | 39.07 | 54.13 |
| KRH70455 | Soybean | cytosol | 51.66 | 53.79 |
| GSMUA_Achr3P04460_001 | Banana | cytosol | 52.98 | 53.69 |
| GSMUA_Achr7P11680_001 | Banana | cytosol | 51.66 | 52.35 |
| PGSC0003DMT400043033 | Potato | cytosol | 54.3 | 51.9 |
| GSMUA_Achr3P07890_001 | Banana | cytosol, mitochondrion, plastid | 50.99 | 51.68 |
| GSMUA_Achr10P... | Banana | cytosol | 49.67 | 51.37 |
| KRH38229 | Soybean | cytosol | 49.67 | 51.02 |
| GSMUA_Achr4P25770_001 | Banana | cytosol, plastid | 50.33 | 49.03 |
| GSMUA_Achr1P02370_001 | Banana | cytosol, plastid | 50.33 | 49.03 |
| GSMUA_Achr3P27280_001 | Banana | cytosol | 32.45 | 35.51 |
| GSMUA_Achr11P... | Banana | cytosol | 29.14 | 33.33 |
| GSMUA_Achr3P15460_001 | Banana | cytosol | 28.48 | 31.39 |
| GSMUA_Achr10P... | Banana | cytosol | 28.48 | 30.5 |
| GSMUA_Achr2P10220_001 | Banana | mitochondrion, plastid | 37.09 | 29.32 |
| GSMUA_Achr11P... | Banana | cytosol | 35.76 | 29.19 |
| GSMUA_Achr2P10210_001 | Banana | cytosol | 28.48 | 29.05 |
| GSMUA_Achr7P13900_001 | Banana | cytosol | 27.15 | 27.89 |
| GSMUA_Achr1P00790_001 | Banana | cytosol | 35.76 | 27.55 |
| GSMUA_Achr6P14470_001 | Banana | cytosol | 23.18 | 24.31 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr1P12840_001 | EnsemblPlants:GSMUA_Achr1T12840_001 | EnsemblPlantsGene:GSMUA_Achr1G12840_001 | Gene3D:3.30.70.100 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0006810 | GO:GO:0008150 | GO:GO:0030001 | GO:GO:0046872 | InterPro:HMA_dom | InterPro:HMA_dom_sf |
| InterPro:IPR006121 | PANTHER:PTHR22814 | PANTHER:PTHR22814:SF176 | PFAM:PF00403 | PFscan:PS50846 | SUPFAM:SSF55008 |
| UniParc:UPI000294A51E | UniProt:M0RZE2 | MapMan:35.1 | : | : | : |
Description
heavy metal-associated domain containing protein, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr1G12840_001]
Coordinates
chr1:-:9860858..9861681
Molecular Weight (calculated)
16699.1 Da
IEP (calculated)
10.155
GRAVY (calculated)
-0.392
Length
151 amino acids
Sequence
(BLAST)
(BLAST)
001: MGAFDHLSDF CSVTETRRAL QIRKRKPLQT VDLKVKMDCD GCERRVKHAV SSIRGVTNVN VNRKQSRVTV TGHIEAKEVV RKIKSTGKRA EAWPYVPYSL
101: VAYPYVAGAY DKKAPAGFVR NVAQAVASPS APEEKISSLF SDENPNACTV M
101: VAYPYVAGAY DKKAPAGFVR NVAQAVASPS APEEKISSLF SDENPNACTV M
001: MGALNYLSEY FSNHFYVSIR KRKKRKVMQT VNIKVKIDCD GCERKIKNAV SSIKGAKSVE VNRKMHKVTV SGYVDPKKVL KTVQSTGKKK AELWPYVPYT
101: MVAYPYAAGA YDKRAPPGFV RKSEQAQAQP GSTDDKLMSL FSDENPNACT VM
101: MVAYPYAAGA YDKRAPPGFV RKSEQAQAQP GSTDDKLMSL FSDENPNACT VM
Arabidopsis Description
HIPP22HIPP22 [Source:UniProtKB/TrEMBL;Acc:A0A178WF89]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.