Factsheet for Solyc02g091300.2.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

plastid 5
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Solyc02g085000.2.1
Solyc03g121460.1.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G17450.1	Solyc03g121460.1.1	AT3G13710.1	21798944
AT5G17450.1	Solyc02g085000.2.1	AT3G50910.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400078635	Potato	cytosol, plastid	97.3	97.3
VIT_14s0006g01800.t01	Wine grape	cytosol	75.0	76.03
Solyc03g043640.2.1	Tomato	cytosol	72.3	72.79
KRG93769	Soybean	cytosol	45.27	69.07
GSMUA_Achr2P07910_001	Banana	cytosol	70.27	68.87
KRG93786	Soybean	cytosol, plastid	43.92	67.01
Solyc04g007630.1.1	Tomato	cytosol	65.54	65.99
GSMUA_Achr1P12840_001	Banana	cytosol	66.22	64.9
KRH76245	Soybean	cytosol	38.51	64.77
KRG93169	Soybean	cytosol	60.81	62.5
KRH15973	Soybean	cytosol, plastid	45.95	62.39
AT5G17450.1	Thale cress	cytosol	61.49	61.07
CDY38431	Canola	cytosol	61.49	61.07
Bra013976.1-P	Field mustard	cytosol	60.81	60.4
CDY16919	Canola	cytosol	60.81	60.4
KRH70455	Soybean	cytosol	58.78	60.0
KRH01671	Soybean	cytosol	58.78	60.0
CDY55938	Canola	cytosol	60.14	59.73
CDX85452	Canola	cytosol	60.14	59.73
Bra023619.1-P	Field mustard	cytosol	60.14	59.73
Solyc04g054500.2.1	Tomato	cytosol	54.73	53.29
Solyc01g111600.2.1	Tomato	nucleus	51.35	49.67
Solyc02g083550.1.1	Tomato	cytosol	52.7	49.06
Solyc05g051820.2.1	Tomato	cytosol	49.32	47.4
Solyc04g072700.2.1	Tomato	cytosol, plastid	46.62	46.0
Solyc03g025790.2.1	Tomato	cytosol	31.08	33.09
Solyc08g075880.2.1	Tomato	endoplasmic reticulum, plastid	37.84	31.28
Solyc02g076880.2.1	Tomato	cytosol	29.05	30.07
Solyc07g055010.2.1	Tomato	extracellular	28.38	27.81

Protein Annotations

Gene3D:3.30.70.100	MapMan:35.1	GO:GO:0003674	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0006810	GO:GO:0008150	GO:GO:0009987	GO:GO:0019725
GO:GO:0030001	GO:GO:0046872	GO:GO:0046914	GO:GO:0046916	InterPro:HMA_dom	InterPro:HMA_dom_sf
InterPro:IPR006121	UniProt:K4BCS8	PFAM:PF00403	PFscan:PS50846	PANTHER:PTHR22814	PANTHER:PTHR22814:SF110
SUPFAM:SSF55008	EnsemblPlantsGene:Solyc02g091300.2	EnsemblPlants:Solyc02g091300.2.1	UniParc:UPI000276798D	SEG:seg	:

Description

No Description!

Coordinates

chr2:+:52636488..52637444

Molecular Weight (calculated)

16992.8 Da

IEP (calculated)

10.489

GRAVY (calculated)

-0.459

Length

148 amino acids

Sequence
(BLAST)

001: MGVLDYLSIF CTVTSTRRRS KRRPLQTVEI KVKMDCDGCE RRVKNAVRRM KGVKTVEVIR KQHRVIVSGY VDPQRVLNRI KSTGKRAEMW PYVPYNLVSY
101: PYVAQAYDKK APSGFVKNVP QALITPNATE ERITHLFSDD NPNACSIM

Best Arabidopsis Sequence Match ( AT1G22990.1 )
(BLAST)

001: MGALNYLSEY FSNHFYVSIR KRKKRKVMQT VNIKVKIDCD GCERKIKNAV SSIKGAKSVE VNRKMHKVTV SGYVDPKKVL KTVQSTGKKK AELWPYVPYT
101: MVAYPYAAGA YDKRAPPGFV RKSEQAQAQP GSTDDKLMSL FSDENPNACT VM

Arabidopsis Description

HIPP22HIPP22 [Source:UniProtKB/TrEMBL;Acc:A0A178WF89]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.