Factsheet for Solyc07g055010.2.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

nucleus 2
cytosol 2
vacuole 1
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

extracellular: 29876421

msms PMID: 29876421 doi

L Ceballos-Laita, E Gutierrez-Carbonell, D Takahashi, A Abadía, M Uemura, J Abadía, AF López-Millán

Cryobiofrontier Research Center, Faculty of Agriculture, Iwate University, Morioka 020-8550, Japan., Plant Stress Physiology Group, Plant Nutrition Department, Aula Dei Experimental Station, CSIC, P.O. Box 13034, 50080 Zaragoza, Spain., United Graduate School of Agricultural Sciences, Iwate University, Morioka 020-8550, Japan., USDA-ARS Children's Nutrition Research Center, Department of Pediatrics, Baylor College of Medicine, 1100 Bates St., Houston, TX 77030, USA.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400052612	Potato	cytosol, mitochondrion, nucleus	72.85	95.65
KRH22286	Soybean	cytosol	54.97	58.45
Solyc02g076880.2.1	Tomato	cytosol	54.97	58.04
KRH27043	Soybean	cytosol	54.3	57.75
VIT_12s0028g02190.t01	Wine grape	cytosol	55.63	57.53
AT1G06330.1	Thale cress	cytosol	52.98	53.33
GSMUA_Achr3P15460_001	Banana	cytosol	48.34	53.28
CDY06206	Canola	cytosol	50.99	50.99
TraesCS3B01G329600.1	Wheat	cytosol	49.67	50.68
Bra032428.1-P	Field mustard	cytosol	52.32	50.64
TraesCS3D01G295000.1	Wheat	cytosol	49.01	50.0
GSMUA_Achr7P13900_001	Banana	cytosol	47.68	48.98
GSMUA_Achr10P...	Banana	cytosol	44.37	47.52
HORVU3Hr1G072940.2	Barley	cytosol	48.34	46.5
GSMUA_Achr6P14470_001	Banana	cytosol	43.05	45.14
Os01t0758000-00	Rice	cytosol	45.03	44.44
Zm00001d043403_P001	Maize	cytosol	44.37	43.23
EES03638	Sorghum	cytosol	45.7	42.86
Solyc03g025790.2.1	Tomato	cytosol	32.45	35.25
Solyc01g111600.2.1	Tomato	nucleus	33.11	32.68
Solyc04g007630.1.1	Tomato	cytosol	31.79	32.65
Solyc05g051820.2.1	Tomato	cytosol	33.11	32.47
Solyc04g054500.2.1	Tomato	cytosol	32.45	32.24
Solyc02g083550.1.1	Tomato	cytosol	33.11	31.45
Solyc04g072700.2.1	Tomato	cytosol, plastid	30.46	30.67
Solyc03g043640.2.1	Tomato	cytosol	28.48	29.25
Solyc02g091300.2.1	Tomato	cytosol, plastid	27.81	28.38
CDY09978	Canola	cytosol	52.32	27.05
Solyc08g075880.2.1	Tomato	endoplasmic reticulum, plastid	30.46	25.7

Protein Annotations

Gene3D:3.30.70.100	MapMan:35.1	GO:GO:0003674	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0006810	GO:GO:0008150	GO:GO:0009987	GO:GO:0019725
GO:GO:0030001	GO:GO:0046872	GO:GO:0046914	GO:GO:0046916	InterPro:HMA_dom	InterPro:HMA_dom_sf
InterPro:IPR006121	UniProt:K4CG41	PFAM:PF00403	PFscan:PS50846	PANTHER:PTHR22814	PANTHER:PTHR22814:SF112
SUPFAM:SSF55008	EnsemblPlantsGene:Solyc07g055010.2	EnsemblPlants:Solyc07g055010.2.1	UniParc:UPI000276C812	:	:

Description

No Description!

Coordinates

chr7:-:63155713..63156856

Molecular Weight (calculated)

17288.3 Da

IEP (calculated)

9.067

GRAVY (calculated)

-0.958

Length

151 amino acids

Sequence
(BLAST)

001: MTTMTEMRVH MDCAGCESKV RKSLEKVKGV DNVEIDMSMQ KVTVTGWADQ KKILKTVRRT GKRAEIWQFP HNPEMRNNPT YVTDHYYQQQ GCSGPTTYYA
101: GEPPASSYNY RKHGYDNYGR AYSLYRGNSN TFGSRVGDAF SDENPRGCNI M

Best Arabidopsis Sequence Match ( AT1G06330.1 )
(BLAST)

001: MTTIEMRVHM DCVGCESRVK NALQKMRGVD AVEIDMVQQK VTVTGYADQK KVLKKVRKTG RRAELWQLPY NPDHMGGSSS NGGYFYNPQG CNGPINHAAP
101: VPTSSYNYYK HGYDSNDYSS YRHHPVHASI FSHQTGSKFS DENPNACSIM

Arabidopsis Description

Heavy metal transport/detoxification superfamily protein [Source:TAIR;Acc:AT1G06330]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.