Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra032428.1-P | Field mustard | cytosol | 92.0 | 88.46 |
| CDY06206 | Canola | cytosol | 88.67 | 88.08 |
| VIT_12s0028g02190.t01 | Wine grape | cytosol | 66.67 | 68.49 |
| KRH22286 | Soybean | cytosol | 64.0 | 67.61 |
| KRH27043 | Soybean | cytosol | 63.33 | 66.9 |
| GSMUA_Achr3P15460_001 | Banana | cytosol | 50.67 | 55.47 |
| Solyc07g055010.2.1 | Tomato | extracellular | 53.33 | 52.98 |
| GSMUA_Achr10P... | Banana | cytosol | 49.33 | 52.48 |
| GSMUA_Achr7P13900_001 | Banana | cytosol | 50.0 | 51.02 |
| Os01t0758000-00 | Rice | cytosol | 49.33 | 48.37 |
| TraesCS3B01G329600.1 | Wheat | cytosol | 47.33 | 47.97 |
| PGSC0003DMT400052612 | Potato | cytosol, mitochondrion, nucleus | 36.67 | 47.83 |
| TraesCS3D01G295000.1 | Wheat | cytosol | 46.67 | 47.3 |
| CDY09978 | Canola | cytosol | 91.33 | 46.92 |
| Zm00001d043403_P001 | Maize | cytosol | 48.0 | 46.45 |
| EES03638 | Sorghum | cytosol | 49.33 | 45.96 |
| GSMUA_Achr6P14470_001 | Banana | cytosol | 44.0 | 45.83 |
| HORVU3Hr1G072940.2 | Barley | cytosol | 45.33 | 43.31 |
| AT1G29100.2 | Thale cress | cytosol | 41.33 | 42.18 |
| AT3G48970.1 | Thale cress | cytosol | 34.67 | 37.14 |
| AT1G71050.1 | Thale cress | cytosol, nucleus, plastid | 35.33 | 34.87 |
| AT4G39700.1 | Thale cress | cytosol | 36.67 | 34.81 |
| AT3G56891.1 | Thale cress | cytosol | 36.67 | 33.13 |
| AT1G22990.1 | Thale cress | cytosol | 33.33 | 32.89 |
| AT5G66110.1 | Thale cress | cytosol | 32.0 | 32.65 |
| AT4G08570.1 | Thale cress | cytosol | 32.0 | 32.0 |
| AT5G17450.1 | Thale cress | cytosol | 30.67 | 30.87 |
| AT2G18196.1 | Thale cress | plastid | 36.0 | 30.34 |
| AT4G35060.1 | Thale cress | cytosol | 30.67 | 30.07 |
| AT4G38580.1 | Thale cress | cytosol | 29.33 | 28.76 |
| AT4G10465.1 | Thale cress | plastid | 34.0 | 27.87 |
Protein Annotations
| Gene3D:3.30.70.100 | MapMan:35.1 | EntrezGene:837144 | UniProt:A0A178WC78 | UniProt:A0A2H1ZEA4 | ProteinID:AEE27975.2 |
| ArrayExpress:AT1G06330 | EnsemblPlantsGene:AT1G06330 | RefSeq:AT1G06330 | TAIR:AT1G06330 | RefSeq:AT1G06330-TAIR-G | EnsemblPlants:AT1G06330.1 |
| TAIR:AT1G06330.1 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0019725 | GO:GO:0030001 |
| GO:GO:0046872 | GO:GO:0046914 | GO:GO:0046916 | InterPro:HMA_dom | InterPro:HMA_dom_sf | InterPro:IPR006121 |
| RefSeq:NP_001318933.1 | ProteinID:OAP16037.1 | PFAM:PF00403 | PFscan:PS50846 | PANTHER:PTHR22814 | PANTHER:PTHR22814:SF112 |
| SUPFAM:SSF55008 | UniParc:UPI0007E0596C | SEG:seg | : | : | : |
Description
Heavy metal transport/detoxification superfamily protein [Source:TAIR;Acc:AT1G06330]
Coordinates
chr1:-:1931229..1932429
Molecular Weight (calculated)
16850.8 Da
IEP (calculated)
8.846
GRAVY (calculated)
-0.763
Length
150 amino acids
Sequence
(BLAST)
(BLAST)
001: MTTIEMRVHM DCVGCESRVK NALQKMRGVD AVEIDMVQQK VTVTGYADQK KVLKKVRKTG RRAELWQLPY NPDHMGGSSS NGGYFYNPQG CNGPINHAAP
101: VPTSSYNYYK HGYDSNDYSS YRHHPVHASI FSHQTGSKFS DENPNACSIM
101: VPTSSYNYYK HGYDSNDYSS YRHHPVHASI FSHQTGSKFS DENPNACSIM
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.