Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra024556.1-P | Field mustard | cytosol | 92.11 | 95.24 |
| CDY21408 | Canola | cytosol | 95.39 | 94.77 |
| CDY25762 | Canola | cytosol | 93.42 | 92.81 |
| CDY04750 | Canola | cytosol | 93.42 | 92.81 |
| Bra012353.1-P | Field mustard | cytosol | 92.11 | 92.11 |
| CDY12499 | Canola | cytosol | 92.11 | 91.5 |
| AT1G71050.1 | Thale cress | cytosol, nucleus, plastid | 75.0 | 75.0 |
| AT5G17450.1 | Thale cress | cytosol | 53.29 | 54.36 |
| AT4G39700.1 | Thale cress | cytosol | 55.92 | 53.8 |
| AT4G38580.1 | Thale cress | cytosol | 53.95 | 53.59 |
| AT4G08570.1 | Thale cress | cytosol | 52.63 | 53.33 |
| AT5G66110.1 | Thale cress | cytosol | 48.03 | 49.66 |
| AT4G35060.1 | Thale cress | cytosol | 46.71 | 46.41 |
| AT3G48970.1 | Thale cress | cytosol | 34.21 | 37.14 |
| AT1G06330.1 | Thale cress | cytosol | 32.89 | 33.33 |
| AT3G56891.1 | Thale cress | cytosol | 33.55 | 30.72 |
| AT2G18196.1 | Thale cress | plastid | 33.55 | 28.65 |
| AT4G10465.1 | Thale cress | plastid | 33.55 | 27.87 |
| AT1G29100.2 | Thale cress | cytosol | 25.66 | 26.53 |
Protein Annotations
| Gene3D:3.30.70.100 | MapMan:35.1 | EntrezGene:838907 | UniProt:A0A178WF89 | ProteinID:AEE30319.1 | EMBL:AF000657 |
| EMBL:AF370526 | EMBL:AF446887 | ProteinID:ANM58861.1 | ArrayExpress:AT1G22990 | EnsemblPlantsGene:AT1G22990 | RefSeq:AT1G22990 |
| TAIR:AT1G22990 | RefSeq:AT1G22990-TAIR-G | EnsemblPlants:AT1G22990.1 | TAIR:AT1G22990.1 | EMBL:AY052659 | EMBL:AY072474 |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0006810 | GO:GO:0006950 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0019725 |
| GO:GO:0030001 | GO:GO:0046872 | GO:GO:0046914 | GO:GO:0046916 | GO:GO:0055073 | GO:GO:0071585 |
| Symbol:HIPP22 | InterPro:HMA_dom | InterPro:HMA_dom_sf | InterPro:IPR006121 | RefSeq:NP_001321267.1 | RefSeq:NP_173712.1 |
| ProteinID:OAP16886.1 | PFAM:PF00403 | PO:PO:0001185 | PO:PO:0007115 | PO:PO:0007616 | PO:PO:0009005 |
| PO:PO:0009009 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009046 |
| PO:PO:0009047 | PO:PO:0025281 | PFscan:PS50846 | PANTHER:PTHR22814 | PANTHER:PTHR22814:SF176 | UniProt:Q93VP2 |
| SUPFAM:SSF55008 | EMBL:U64910 | UniParc:UPI00000A2414 | : | : | : |
Description
HIPP22HIPP22 [Source:UniProtKB/TrEMBL;Acc:A0A178WF89]
Coordinates
chr1:+:8139114..8140227
Molecular Weight (calculated)
17107.8 Da
IEP (calculated)
10.332
GRAVY (calculated)
-0.567
Length
152 amino acids
Sequence
(BLAST)
(BLAST)
001: MGALNYLSEY FSNHFYVSIR KRKKRKVMQT VNIKVKIDCD GCERKIKNAV SSIKGAKSVE VNRKMHKVTV SGYVDPKKVL KTVQSTGKKK AELWPYVPYT
101: MVAYPYAAGA YDKRAPPGFV RKSEQAQAQP GSTDDKLMSL FSDENPNACT VM
101: MVAYPYAAGA YDKRAPPGFV RKSEQAQAQP GSTDDKLMSL FSDENPNACT VM
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.