CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY25762	Canola	cytosol	98.69	98.69
Bra012353.1-P	Field mustard	cytosol	97.39	98.03
CDY21408	Canola	cytosol	92.16	92.16
AT1G22990.1	Thale cress	cytosol	91.5	92.11
CDY04750	Canola	cytosol	90.85	90.85
CDX72773	Canola	cytosol	75.16	76.67
CDX96299	Canola	cytosol	75.16	76.67
CDY55938	Canola	cytosol	54.25	55.7
CDY38431	Canola	cytosol	54.25	55.7
CDX85452	Canola	cytosol	54.25	55.7
CDX75144	Canola	cytosol	45.75	55.56
CDY16919	Canola	cytosol	53.59	55.03
CDY65011	Canola	cytosol	52.94	52.94
CDX90282	Canola	cytosol	52.29	52.29
CDX86196	Canola	cytosol	53.59	51.9
CDY42647	Canola	cytosol	53.59	51.9
CDY41999	Canola	cytosol	53.59	51.9
CDX72748	Canola	cytosol	51.63	51.63
CDY12089	Canola	cytosol	51.63	51.63
CDY36193	Canola	cytosol	49.67	50.67
CDX88005	Canola	cytosol	47.06	49.66
CDY07874	Canola	cytosol	47.06	49.66
CDY52653	Canola	cytosol	48.37	48.37
CDX69108	Canola	cytosol	47.71	47.71
CDX76309	Canola	cytosol	47.71	47.4
CDY17504	Canola	cytosol	47.06	46.75
CDY08096	Canola	cytosol	33.33	36.96
CDY05886	Canola	cytosol	33.33	36.96
CDY06206	Canola	cytosol	30.72	31.13
CDY27183	Canola	cytosol	32.03	31.01
CDY47384	Canola	cytosol, extracellular	32.03	30.82
CDX72102	Canola	cytosol	31.37	30.38
CDX76017	Canola	cytosol	30.72	29.75
CDX86861	Canola	plastid	35.29	29.67
CDX99542	Canola	plastid	35.29	29.67
CDX94648	Canola	cytosol	26.8	29.08
CDY57455	Canola	cytosol	26.8	29.08
CDY13354	Canola	cytosol	33.33	28.65
CDX67533	Canola	cytosol	33.33	28.65
CDX85985	Canola	mitochondrion	18.95	24.17
CDY09978	Canola	cytosol	32.68	17.12

Protein Annotations

EnsemblPlants:CDY12499	EnsemblPlantsGene:GSBRNA2T00061817001	Gene3D:3.30.70.100	GO:A0A078FHM9	GO:GO:0003674	GO:GO:0005488
GO:GO:0006810	GO:GO:0008150	GO:GO:0030001	GO:GO:0046872	InterPro:HMA_dom	InterPro:HMA_dom_sf
InterPro:IPR006121	PANTHER:PTHR22814	PANTHER:PTHR22814:SF176	PFAM:PF00403	PFscan:PS50846	ProteinID:CDY12499
ProteinID:CDY12499.1	SUPFAM:SSF55008	UniParc:UPI0004EEEE09	UniProt:A0A078FHM9	MapMan:35.1	:

Description

BnaC07g13390DBnaC07g13390D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FHM9]

Coordinates

chrLK032023:-:407303..408060

Molecular Weight (calculated)

17200.8 Da

IEP (calculated)

10.275

GRAVY (calculated)

-0.569

Length

153 amino acids

Sequence
(BLAST)

001: MGALDFLSDY FSNNFDVSIR KRKKHKVWQQ TVNIKVKIDC DGCERKIKNA VSSMKGAKSV EVNRKMHKVT VSGYVDPKKV LKRVQSTGKK KAELWPYVPY
101: TMVAYPYAAG AYDKRAPAGF VRKSEQAQAQ PGGTDDKLMS LFSDENPNAC IVM

Best Arabidopsis Sequence Match ( AT1G22990.1 )
(BLAST)

001: MGALNYLSEY FSNHFYVSIR KRKKRKVMQT VNIKVKIDCD GCERKIKNAV SSIKGAKSVE VNRKMHKVTV SGYVDPKKVL KTVQSTGKKK AELWPYVPYT
101: MVAYPYAAGA YDKRAPPGFV RKSEQAQAQP GSTDDKLMSL FSDENPNACT VM

Arabidopsis Description

HIPP22HIPP22 [Source:UniProtKB/TrEMBL;Acc:A0A178WF89]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.