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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 1
  • golgi 1
  • cytosol 3
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra018022.1-P Field mustard cytosol 100.0 100.0
CDY05886 Canola cytosol 100.0 100.0
AT3G48970.1 Thale cress cytosol 97.1 95.71
KRH38480 Soybean cytosol 66.67 77.31
KRH09015 Soybean cytosol 76.81 76.81
PGSC0003DMT400037204 Potato cytosol 71.74 71.22
Solyc03g025790.2.1 Tomato cytosol 71.01 70.5
GSMUA_Achr3P27280_001 Banana cytosol 59.42 59.42
VIT_16s0050g00150.t01 Wine grape mitochondrion, plastid 70.29 56.4
CDX75144 Canola cytosol 34.78 38.1
CDX72773 Canola cytosol 39.13 36.0
CDX96299 Canola cytosol 39.13 36.0
CDY42647 Canola cytosol 39.13 34.18
CDX86196 Canola cytosol 39.13 34.18
CDY41999 Canola cytosol 39.13 34.18
CDY04750 Canola cytosol 37.68 33.99
CDY21408 Canola cytosol 37.68 33.99
CDY06206 Canola cytosol 36.96 33.77
CDY36193 Canola cytosol 36.23 33.33
CDY12499 Canola cytosol 36.96 33.33
CDY25762 Canola cytosol 36.96 33.33
CDY07874 Canola cytosol 34.78 33.1
CDX88005 Canola cytosol 34.78 33.1
CDX94648 Canola cytosol 33.33 32.62
CDY57455 Canola cytosol 33.33 32.62
CDY38431 Canola cytosol 34.78 32.21
CDY16919 Canola cytosol 34.78 32.21
CDX90282 Canola cytosol 34.06 30.72
CDX85452 Canola cytosol 32.61 30.2
CDY55938 Canola cytosol 32.61 30.2
CDY65011 Canola cytosol 33.33 30.07
CDY12089 Canola cytosol 33.33 30.07
CDX72748 Canola cytosol 33.33 30.07
CDY52653 Canola cytosol 33.33 30.07
CDX85985 Canola mitochondrion 26.09 30.0
CDY27183 Canola cytosol 34.06 29.75
CDX69108 Canola cytosol 32.61 29.41
CDY17504 Canola cytosol 32.61 29.22
CDX76309 Canola cytosol 32.61 29.22
CDX76017 Canola cytosol 33.33 29.11
CDX72102 Canola cytosol 33.33 29.11
CDY47384 Canola cytosol, extracellular 32.61 28.3
CDY13354 Canola cytosol 36.23 28.09
CDX67533 Canola cytosol 36.23 28.09
CDX99542 Canola plastid 36.23 27.47
CDX86861 Canola plastid 36.23 27.47
CDY09978 Canola cytosol 38.41 18.15
Protein Annotations
Gene3D:3.30.70.100MapMan:35.1GO:A0A078EXI1UniProt:A0A078EXI1EnsemblPlants:CDY08096ProteinID:CDY08096
ProteinID:CDY08096.1GO:GO:0003674GO:GO:0005488GO:GO:0006810GO:GO:0008150GO:GO:0030001
GO:GO:0046872EnsemblPlantsGene:GSBRNA2T00125369001InterPro:HMA_domInterPro:HMA_dom_sfInterPro:IPR006121PFAM:PF00403
PFscan:PS50846PANTHER:PTHR22814PANTHER:PTHR22814:SF140SUPFAM:SSF55008UniParc:UPI000253F23BSEG:seg
Description
BnaA06g16300DBnaA06g16300D protein [Source:UniProtKB/TrEMBL;Acc:A0A078EXI1]
Coordinates
chrLK031983:-:271980..273054
Molecular Weight (calculated)
15460.4 Da
IEP (calculated)
8.080
GRAVY (calculated)
-0.413
Length
138 amino acids
Sequence
(BLAST)
001: MTVEIRVPNL DCEGCASKLK KTLLKLKGVE EVEVEMESQK VTARGYRLEE KKVLKAVRRA GKAAEPWPYR LGNSHFASFY KYPSYVTNHY YSDAHRTDPT
101: GGVHTFFHTP AVYSVAVAGD EIAASMFSDD NPHACTIM
Best Arabidopsis Sequence Match ( AT3G48970.3 )
(BLAST)
001: MTVEIRVPNL DCEGCASKLR KTLLKLKGVE EVEVEMETQK VTARGYRLEE KKVLKAVRRA GKAAELWPYR LGNSHFASFY KYPSYVTNHY YSDAHRTDPT
101: GGVHTFFHTP ADYSVAVAGD EIAASMFSDD NPHACTIM
Arabidopsis Description
HIPP31Heavy metal-associated isoprenylated plant protein 31 [Source:UniProtKB/Swiss-Prot;Acc:Q84K70]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.