Factsheet for GSMUA_Achr3P27280_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400037204	Potato	cytosol	65.22	64.75
Solyc03g025790.2.1	Tomato	cytosol	64.49	64.03
KRH09015	Soybean	cytosol	63.77	63.77
KRH38480	Soybean	cytosol	53.62	62.18
Bra018022.1-P	Field mustard	cytosol	59.42	59.42
CDY05886	Canola	cytosol	59.42	59.42
CDY08096	Canola	cytosol	59.42	59.42
AT3G48970.1	Thale cress	cytosol	58.7	57.86
VIT_16s0050g00150.t01	Wine grape	mitochondrion, plastid	65.22	52.33
GSMUA_Achr7P13900_001	Banana	cytosol	41.3	38.78
GSMUA_Achr3P07890_001	Banana	cytosol, mitochondrion, plastid	40.58	37.58
GSMUA_Achr3P15460_001	Banana	cytosol	36.96	37.23
GSMUA_Achr3P04460_001	Banana	cytosol	39.86	36.91
GSMUA_Achr10P...	Banana	cytosol	38.41	36.3
GSMUA_Achr10P...	Banana	cytosol	36.96	36.17
GSMUA_Achr4P01830_001	Banana	cytosol	37.68	34.9
GSMUA_Achr4P25770_001	Banana	cytosol, plastid	36.96	32.9
GSMUA_Achr11P...	Banana	cytosol	31.16	32.58
GSMUA_Achr1P12840_001	Banana	cytosol	35.51	32.45
GSMUA_Achr1P02370_001	Banana	cytosol, plastid	36.23	32.26
GSMUA_Achr2P10210_001	Banana	cytosol	34.06	31.76
GSMUA_Achr6P14470_001	Banana	cytosol	31.88	30.56
GSMUA_Achr7P11680_001	Banana	cytosol	31.88	29.53
GSMUA_Achr2P07910_001	Banana	cytosol	31.88	29.14
GSMUA_Achr11P...	Banana	cytosol	31.16	23.24
GSMUA_Achr2P10220_001	Banana	mitochondrion, plastid	28.99	20.94
GSMUA_Achr1P00790_001	Banana	cytosol	29.71	20.92

Protein Annotations

EnsemblPlants:GSMUA_Achr3P27280_001	EnsemblPlants:GSMUA_Achr3T27280_001	EnsemblPlantsGene:GSMUA_Achr3G27280_001	Gene3D:3.30.70.100	GO:GO:0003674	GO:GO:0005488
GO:GO:0006810	GO:GO:0008150	GO:GO:0030001	GO:GO:0046872	InterPro:HMA_dom	InterPro:HMA_dom_sf
InterPro:Heavy-metal-associated_CS	InterPro:IPR006121	PANTHER:PTHR22814	PANTHER:PTHR22814:SF140	PFAM:PF00403	PFscan:PS50846
ScanProsite:PS01047	SUPFAM:SSF55008	UniParc:UPI00029534D6	UniProt:M0SI94	MapMan:35.1	:

Description

Putative heavy metal-associated domain containing protein, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr3G27280_001]

Coordinates

chr3:-:26840605..26841113

Molecular Weight (calculated)

15145.0 Da

IEP (calculated)

7.448

GRAVY (calculated)

-0.216

Length

138 amino acids

Sequence
(BLAST)

001: MQGLEVRVRN LDCEGCSSKI RRALLKLKGV KEVDIDVESQ KITVRGYAVH EKKVIKAIRS IGKTAEPWPY PRGHSHLSSF YTYPAGIASS YYSETPGCDA
101: AEVQAFFHTP AVYSVAVASD ETVASLFSDE NPNACTVM

Best Arabidopsis Sequence Match ( AT3G48970.1 )
(BLAST)

001: MSMTVEIRVP NLDCEGCASK LRKTLLKLKG VEEVEVEMET QKVTARGYRL EEKKVLKAVR RAGKAAELWP YRLGNSHFAS FYKYPSYVTN HYYSDAHRTD
101: PTGGVHTFFH TPADYSVAVA GDEIAASMFS DDNPHACTIM

Arabidopsis Description

HIPP31Heavy metal-associated isoprenylated plant protein 31 [Source:UniProtKB/Swiss-Prot;Acc:Q84K70]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.