Factsheet for GSMUA_Achr7P11680_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
extracellular 1
cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr4P01830_001	Banana	cytosol	66.44	66.44
GSMUA_Achr3P04460_001	Banana	cytosol	65.1	65.1
KRH59402	Soybean	cytosol	65.77	64.05
KRH43240	Soybean	cytosol	65.77	64.05
GSMUA_Achr10P...	Banana	cytosol	61.74	63.01
GSMUA_Achr3P07890_001	Banana	cytosol, mitochondrion, plastid	62.42	62.42
VIT_07s0031g01160.t01	Wine grape	cytosol	63.09	62.25
Solyc04g054500.2.1	Tomato	cytosol	61.07	59.87
PGSC0003DMT400056666	Potato	cytosol	59.06	57.89
KRH31264	Soybean	cytosol	59.73	57.42
Solyc05g051820.2.1	Tomato	cytosol	59.06	57.14
PGSC0003DMT400056199	Potato	cytosol	59.06	57.14
Bra011840.1-P	Field mustard	cytosol	59.06	55.7
CDY42647	Canola	cytosol	59.06	55.7
CDY41999	Canola	cytosol	59.06	55.7
CDX86196	Canola	cytosol	59.06	55.7
TraesCS2D01G168000.1	Wheat	cytosol	60.4	55.56
TraesCS2B01G186900.1	Wheat	cytosol	60.4	55.56
Os03t0383900-01	Rice	cytosol	58.39	55.41
KRG97609	Soybean	cytosol	58.39	55.41
EER99736	Sorghum	cytosol	62.42	55.36
AT4G39700.1	Thale cress	cytosol	57.72	54.43
TraesCS2A01G160700.1	Wheat	cytosol	59.06	54.32
GSMUA_Achr2P07910_001	Banana	cytosol	53.69	52.98
GSMUA_Achr1P12840_001	Banana	cytosol	52.35	51.66
GSMUA_Achr4P25770_001	Banana	cytosol, plastid	50.34	48.39
GSMUA_Achr1P02370_001	Banana	cytosol, plastid	48.99	47.1
GSMUA_Achr11P...	Banana	cytosol	34.23	38.64
GSMUA_Achr10P...	Banana	cytosol	33.56	35.46
GSMUA_Achr3P15460_001	Banana	cytosol	32.21	35.04
GSMUA_Achr2P10210_001	Banana	cytosol	32.89	33.11
GSMUA_Achr3P27280_001	Banana	cytosol	29.53	31.88
GSMUA_Achr7P13900_001	Banana	cytosol	30.87	31.29
GSMUA_Achr11P...	Banana	cytosol	36.91	29.73
GSMUA_Achr6P14470_001	Banana	cytosol	28.19	29.17
GSMUA_Achr1P00790_001	Banana	cytosol	38.26	29.08
GSMUA_Achr2P10220_001	Banana	mitochondrion, plastid	36.24	28.27

Protein Annotations

EnsemblPlants:GSMUA_Achr7P11680_001	EnsemblPlants:GSMUA_Achr7T11680_001	EnsemblPlantsGene:GSMUA_Achr7G11680_001	Gene3D:3.30.70.100	GO:GO:0003674	GO:GO:0005488
GO:GO:0006810	GO:GO:0008150	GO:GO:0030001	GO:GO:0046872	InterPro:HMA_dom	InterPro:HMA_dom_sf
InterPro:IPR006121	PANTHER:PTHR22814	PANTHER:PTHR22814:SF171	PFAM:PF00403	PFscan:PS50846	SUPFAM:SSF55008
UniParc:UPI000294E44B	UniProt:M0TGQ6	MapMan:35.1	:	:	:

Description

heavy metal-associated domain containing protein, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr7G11680_001]

Coordinates

chr7:+:9300093..9300620

Molecular Weight (calculated)

16654.9 Da

IEP (calculated)

8.203

GRAVY (calculated)

-0.547

Length

149 amino acids

Sequence
(BLAST)

001: MEETLDYLSG FLCTGHKVKK KQFQTVELKV RMDCDGCELK VKKALSSING VQSVDVDRKQ QKATVTGYVE PNQVLRKAKA TGNKAELWPY LPYSLVTHPY
101: TAGIYDKKAP SGHVRNVECV AVVSDHGRKQ EDQLADMFSE DNPNSCSIM

Best Arabidopsis Sequence Match ( AT4G39700.1 )
(BLAST)

001: MGVGGTLEYI SELIGNGGSH SYGKRKKKKQ FQTVELKVRM DCDGCVLKIK NSLSSLKGVK TVEINKKQQK VTVSGYADAS KVLKKAKATG KKAEIWPYVP
101: YNLVAQPYIA QAYDKKAPPG YVRKVDPNVT TGTMAVYYDD PSYTSLFSDD NPNACSIM

Arabidopsis Description

HIPP23Heavy metal-associated isoprenylated plant protein 23 [Source:UniProtKB/Swiss-Prot;Acc:O65657]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.