Factsheet for GSMUA_Achr2P10210_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_08s0040g00130.t01	Wine grape	cytosol	58.11	68.8
KRH57823	Soybean	cytosol	66.89	66.89
TraesCS6D01G240700.1	Wheat	mitochondrion	64.19	63.33
TraesCS6A01G259700.1	Wheat	mitochondrion	60.81	62.94
TraesCS6B01G287000.1	Wheat	mitochondrion	62.84	61.18
Zm00001d051472_P001	Maize	mitochondrion	60.81	60.0
OQU85626	Sorghum	mitochondrion	60.81	54.55
Bra014664.1-P	Field mustard	cytosol	45.27	49.63
Bra007280.1-P	Field mustard	cytosol	52.7	49.37
CDX72102	Canola	cytosol	52.7	49.37
CDY27183	Canola	cytosol	52.7	49.37
CDY47384	Canola	cytosol, extracellular	52.7	49.06
GSMUA_Achr10P...	Banana	cytosol	46.62	48.94
GSMUA_Achr3P15460_001	Banana	cytosol	45.27	48.91
AT3G56891.1	Thale cress	cytosol	54.05	48.19
CDX76017	Canola	cytosol	50.68	47.47
GSMUA_Achr11P...	Banana	cytosol	41.89	46.97
HORVU6Hr1G066220.1	Barley	cytosol	57.43	45.95
GSMUA_Achr7P13900_001	Banana	cytosol	45.27	45.58
GSMUA_Achr6P14470_001	Banana	cytosol	43.24	44.44
GSMUA_Achr3P04460_001	Banana	cytosol	39.86	39.6
GSMUA_Achr3P07890_001	Banana	cytosol, mitochondrion, plastid	39.19	38.93
GSMUA_Achr10P...	Banana	cytosol	37.84	38.36
GSMUA_Achr4P01830_001	Banana	cytosol	37.84	37.58
GSMUA_Achr1P02370_001	Banana	cytosol, plastid	37.84	36.13
GSMUA_Achr11P...	Banana	cytosol	44.59	35.68
GSMUA_Achr2P10220_001	Banana	mitochondrion, plastid	45.27	35.08
GSMUA_Achr4P25770_001	Banana	cytosol, plastid	36.49	34.84
GSMUA_Achr3P27280_001	Banana	cytosol	31.76	34.06
GSMUA_Achr1P00790_001	Banana	cytosol	44.59	33.67
GSMUA_Achr7P11680_001	Banana	cytosol	33.11	32.89
GSMUA_Achr2P07910_001	Banana	cytosol	31.08	30.46
GSMUA_Achr1P12840_001	Banana	cytosol	29.05	28.48

Protein Annotations

EnsemblPlants:GSMUA_Achr2P10210_001	EnsemblPlants:GSMUA_Achr2T10210_001	EnsemblPlantsGene:GSMUA_Achr2G10210_001	Gene3D:3.30.70.100	GO:GO:0003674	GO:GO:0005488
GO:GO:0006810	GO:GO:0008150	GO:GO:0030001	GO:GO:0046872	InterPro:HMA_dom	InterPro:HMA_dom_sf
InterPro:IPR006121	PANTHER:PTHR22814	PANTHER:PTHR22814:SF85	PFAM:PF00403	PFscan:PS50846	SUPFAM:SSF55008
UniParc:UPI0002950FC0	UniProt:M0S6R2	MapMan:35.1	:	:	:

Description

Putative heavy metal-associated domain containing protein, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr2G10210_001]

Coordinates

chr2:-:13392187..13392892

Molecular Weight (calculated)

17253.5 Da

IEP (calculated)

6.787

GRAVY (calculated)

-0.437

Length

148 amino acids

Sequence
(BLAST)

001: MFRFRRQKTS TSDALSIVEL MVHMDCEGCE RRVRKAISKL NGVDTVEIDM DKQKVTVTGY VEERKVIKAV RRTGRKAELW PFPYDAEYYP FALQYLEDST
101: FSSTHNYYRH GYTSTVHGYF PDPAYSMIVD DHAFALFNDD NVHACVIM

Best Arabidopsis Sequence Match ( AT3G56891.1 )
(BLAST)

001: MFDWIHGNSR LPIALSIVEL LVDMDCKGCE KKVRRAISKL DGVDTVEIDV DRQKVTVTGY VDREEVLKMV KRTGRTAEYW PFPYNGYYGD YYTYPSQHLE
101: QSDQKIYQTI SYSGKYDFYD VDDFQNTNNS TINGYYPSSS QKVQPNIDEN ALHLFSDDNA HACTIM

Arabidopsis Description

HIPP45Heavy metal-associated isoprenylated plant protein 45 [Source:UniProtKB/Swiss-Prot;Acc:B3H6D0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.