Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 3
- plastid 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| GSMUA_Achr10P... | |
| GSMUA_Achr6P02700_001 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT2G18196.1 | GSMUA_Achr10P... | AT5G15210.1 | 18974936 |
| AT2G18196.1 | GSMUA_Achr6P02700_001 | AT5G15210.1 | 18974936 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr11P... | Banana | cytosol | 58.67 | 87.12 |
| GSMUA_Achr2P10220_001 | Banana | mitochondrion, plastid | 73.98 | 75.92 |
| GSMUA_Achr11P... | Banana | cytosol | 71.43 | 75.68 |
| VIT_02s0025g03010.t01 | Wine grape | cytosol, mitochondrion | 53.06 | 73.24 |
| PGSC0003DMT400079287 | Potato | cytosol | 33.67 | 68.04 |
| Os03t0120400-01 | Rice | plastid | 66.84 | 67.88 |
| TraesCS4B01G348900.1 | Wheat | plastid | 64.29 | 64.62 |
| TraesCS4D01G343300.1 | Wheat | plastid | 64.29 | 64.62 |
| TraesCS5A01G516900.1 | Wheat | plastid | 64.29 | 64.62 |
| EER92967 | Sorghum | plastid | 62.24 | 62.89 |
| Zm00001d027405_P001 | Maize | plastid | 60.71 | 61.34 |
| KRH34236 | Soybean | cytosol | 55.1 | 60.67 |
| KRG92555 | Soybean | cytosol | 53.57 | 58.99 |
| CDY13354 | Canola | cytosol | 53.06 | 58.43 |
| CDX67533 | Canola | cytosol | 53.06 | 58.43 |
| Bra028528.1-P | Field mustard | cytosol | 53.06 | 58.43 |
| PGSC0003DMT400079324 | Potato | endoplasmic reticulum | 53.57 | 58.33 |
| Solyc08g075880.2.1 | Tomato | endoplasmic reticulum, plastid | 53.06 | 58.1 |
| AT2G18196.1 | Thale cress | plastid | 52.04 | 57.3 |
| Bra037919.1-P | Field mustard | plastid | 52.55 | 56.59 |
| CDX99542 | Canola | plastid | 52.04 | 56.04 |
| CDX86861 | Canola | plastid | 52.04 | 56.04 |
| AT4G10465.1 | Thale cress | plastid | 51.53 | 55.19 |
| PGSC0003DMT400012844 | Potato | plastid | 51.02 | 54.35 |
| CDX85985 | Canola | mitochondrion | 33.16 | 54.17 |
| Os10t0537400-00 | Rice | cytosol | 50.0 | 52.97 |
| TraesCS1B01G215100.1 | Wheat | cytosol, plastid | 46.94 | 46.7 |
| TraesCS1A01G200700.1 | Wheat | cytosol, plastid | 46.43 | 46.67 |
| KXG39011 | Sorghum | cytosol | 48.47 | 45.67 |
| TraesCS1D01G204100.1 | Wheat | cytosol, plastid | 45.41 | 45.18 |
| GSMUA_Achr2P10210_001 | Banana | cytosol | 33.67 | 44.59 |
| HORVU4Hr1G085090.2 | Barley | plastid | 63.78 | 43.71 |
| GSMUA_Achr4P01830_001 | Banana | cytosol | 30.1 | 39.6 |
| GSMUA_Achr3P15460_001 | Banana | cytosol | 27.55 | 39.42 |
| GSMUA_Achr7P11680_001 | Banana | cytosol | 29.08 | 38.26 |
| GSMUA_Achr10P... | Banana | cytosol | 27.04 | 37.59 |
| GSMUA_Achr3P04460_001 | Banana | cytosol | 28.57 | 37.58 |
| GSMUA_Achr3P07890_001 | Banana | cytosol, mitochondrion, plastid | 28.57 | 37.58 |
| GSMUA_Achr2P07910_001 | Banana | cytosol | 28.57 | 37.09 |
| GSMUA_Achr10P... | Banana | cytosol | 27.55 | 36.99 |
| GSMUA_Achr7P13900_001 | Banana | cytosol | 27.04 | 36.05 |
| GSMUA_Achr1P12840_001 | Banana | cytosol | 27.55 | 35.76 |
| GSMUA_Achr4P25770_001 | Banana | cytosol, plastid | 27.55 | 34.84 |
| GSMUA_Achr1P02370_001 | Banana | cytosol, plastid | 27.04 | 34.19 |
| GSMUA_Achr6P14470_001 | Banana | cytosol | 24.49 | 33.33 |
| GSMUA_Achr3P27280_001 | Banana | cytosol | 20.92 | 29.71 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr1P00790_001 | EnsemblPlants:GSMUA_Achr1T00790_001 | EnsemblPlantsGene:GSMUA_Achr1G00790_001 | Gene3D:3.30.70.100 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0006810 | GO:GO:0008150 | GO:GO:0030001 | GO:GO:0046872 | InterPro:HMA_dom | InterPro:HMA_dom_sf |
| InterPro:IPR006121 | PANTHER:PTHR22814 | PANTHER:PTHR22814:SF280 | PFAM:PF00403 | PFscan:PS50846 | SEG:seg |
| SUPFAM:SSF55008 | UniParc:UPI00029656FD | UniProt:M0RVY7 | MapMan:35.1 | : | : |
Description
heavy metal-associated domain containing protein, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr1G00790_001]
Coordinates
chr1:+:621947..623035
Molecular Weight (calculated)
22648.5 Da
IEP (calculated)
9.038
GRAVY (calculated)
-0.904
Length
196 amino acids
Sequence
(BLAST)
(BLAST)
001: MGRDLSSWLS NLSFGYRGDH RKSRNPSIYY DNPSNSSSSN DSYYYIEDSN NMIRRKMAKG RPLSLQTVEL KVRMCCTGCE RVVKHALQKL RGVDSVEVEL
101: ELEKVTVTGY VDRNKVLKEA RRSGKKAEFW PNPGLPLYFT TAKNYFHDED SFRSSYNYWR HGYNGDKHGH VPAPHRGEDR VSNMFNDDDV NACSVM
101: ELEKVTVTGY VDRNKVLKEA RRSGKKAEFW PNPGLPLYFT TAKNYFHDED SFRSSYNYWR HGYNGDKHGH VPAPHRGEDR VSNMFNDDDV NACSVM
001: MSSLIVKSLG SIVSIIARIF FFRRSRPVSN PRTTAHISYF RMSRKRPLSL QTVELKVRMC CTGCVRIVRN AISKLRGVDS VEVDKELGRV RVVGYVDRNK
101: VLKAVRRAGK RAEFSPYPEP PLYFTSTQNY FVDPSKEFKE SYNYYRHGYN GTEQHGNIPV GSRGDDRVSN MFNDDNVNAC RLM
101: VLKAVRRAGK RAEFSPYPEP PLYFTSTQNY FVDPSKEFKE SYNYYRHGYN GTEQHGNIPV GSRGDDRVSN MFNDDNVNAC RLM
Arabidopsis Description
HIPP44Heavy metal-associated isoprenylated plant protein 44 [Source:UniProtKB/Swiss-Prot;Acc:F4JMB8]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.