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Banana
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Banana
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion, plastid, cytosol

Predictor Summary:
  • nucleus 1
  • plastid 3
  • mitochondrion 2
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, mitochondrion, plastid
Any Predictor:cytosol, mitochondrion, nucleus, plastid
BaCelLo:nucleus
iPSORT:plastid
MultiLoc:mitochondrion
Plant-mPloc:plastid
PProwler:mitochondrion
WoLF PSORT:plastid
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
GSMUA_Achr4P01830_001 Banana cytosol 83.89 83.89
GSMUA_Achr3P04460_001 Banana cytosol 81.21 81.21
EER96651 Sorghum cytosol 75.84 70.19
GSMUA_Achr10P... Banana cytosol 68.46 69.86
HORVU5Hr1G057730.1 Barley cytosol 75.17 69.57
TraesCS5D01G199500.1 Wheat cytosol 74.5 69.38
TraesCS5A01G191400.1 Wheat cytosol 74.5 69.38
Zm00001d020257_P001 Maize cytosol 75.17 69.14
TraesCS5B01G191700.1 Wheat cytosol 74.5 68.94
Zm00001d005656_P001 Maize mitochondrion 72.48 67.08
KRH43240 Soybean cytosol 68.46 66.67
KRH59402 Soybean cytosol 67.79 66.01
VIT_07s0031g01160.t01 Wine grape cytosol 65.1 64.24
TraesCS4B01G105100.1 Wheat mitochondrion, plastid 63.09 63.51
TraesCS4A01G211400.1 Wheat mitochondrion, plastid 63.09 63.51
Solyc04g054500.2.1 Tomato cytosol 63.76 62.5
GSMUA_Achr7P11680_001 Banana cytosol 62.42 62.42
TraesCS4D01G102000.1 Wheat mitochondrion, plastid 61.07 61.49
Bra011840.1-P Field mustard cytosol 64.43 60.76
CDX86196 Canola cytosol 64.43 60.76
CDY41999 Canola cytosol 64.43 60.76
CDY42647 Canola cytosol 64.43 60.76
PGSC0003DMT400056666 Potato cytosol 61.74 60.53
AT4G39700.1 Thale cress cytosol 63.09 59.49
KRH31264 Soybean cytosol 61.74 59.35
PGSC0003DMT400056199 Potato cytosol 61.07 59.09
Os08t0403300-00 Rice cytosol 59.06 58.67
Solyc05g051820.2.1 Tomato cytosol 59.73 57.79
Zm00001d032291_P001 Maize cytosol 55.7 57.64
KRG97609 Soybean cytosol 60.4 57.32
EES13808 Sorghum cytosol 55.7 57.24
GSMUA_Achr1P02370_001 Banana cytosol, plastid 57.72 55.48
GSMUA_Achr4P25770_001 Banana cytosol, plastid 57.72 55.48
Os09t0364800-01 Rice cytosol, nucleus 41.61 55.36
HORVU4Hr1G017070.3 Barley cytosol 61.74 54.12
GSMUA_Achr2P07910_001 Banana cytosol 52.35 51.66
GSMUA_Achr1P12840_001 Banana cytosol 51.68 50.99
GSMUA_Achr3P27280_001 Banana cytosol 37.58 40.58
GSMUA_Achr2P10210_001 Banana cytosol 38.93 39.19
GSMUA_Achr10P... Banana cytosol 36.91 39.01
GSMUA_Achr11P... Banana cytosol 33.56 37.88
GSMUA_Achr3P15460_001 Banana cytosol 32.21 35.04
GSMUA_Achr7P13900_001 Banana cytosol 33.56 34.01
GSMUA_Achr6P14470_001 Banana cytosol 31.54 32.64
GSMUA_Achr11P... Banana cytosol 38.93 31.35
GSMUA_Achr2P10220_001 Banana mitochondrion, plastid 38.93 30.37
GSMUA_Achr1P00790_001 Banana cytosol 37.58 28.57
Protein Annotations
EnsemblPlants:GSMUA_Achr3P07890_001EnsemblPlants:GSMUA_Achr3T07890_001EnsemblPlantsGene:GSMUA_Achr3G07890_001Gene3D:3.30.70.100GO:GO:0003674GO:GO:0005488
GO:GO:0006810GO:GO:0008150GO:GO:0030001GO:GO:0046872InterPro:HMA_domInterPro:HMA_dom_sf
InterPro:IPR006121PANTHER:PTHR22814PANTHER:PTHR22814:SF165PFAM:PF00403PFscan:PS50846SUPFAM:SSF55008
UniParc:UPI0002969EDCUniProt:M0SCQ6MapMan:35.1:::
Description
heavy metal-associated domain containing protein, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr3G07890_001]
Coordinates
chr3:+:5469393..5470011
Molecular Weight (calculated)
16702.2 Da
IEP (calculated)
10.071
GRAVY (calculated)
-0.440
Length
149 amino acids
Sequence
(BLAST)
001: MGGTLDFLSS LLGGGHRYNK RKQFQTVELR VRMDCEGCEL KVRNALSTMK GVRSVDISRK QYKVTVTGYV EPHKVVKRVK STGKKAEIWP YVPYNVVARP
101: YAAQTYDKKA PAGYVRNVEA IRVSSQVVKP EDELAALFSD DNPNACSIM
Best Arabidopsis Sequence Match ( AT4G39700.1 )
(BLAST)
001: MGVGGTLEYI SELIGNGGSH SYGKRKKKKQ FQTVELKVRM DCDGCVLKIK NSLSSLKGVK TVEINKKQQK VTVSGYADAS KVLKKAKATG KKAEIWPYVP
101: YNLVAQPYIA QAYDKKAPPG YVRKVDPNVT TGTMAVYYDD PSYTSLFSDD NPNACSIM
Arabidopsis Description
HIPP23Heavy metal-associated isoprenylated plant protein 23 [Source:UniProtKB/Swiss-Prot;Acc:O65657]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.