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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 2
  • plastid 2
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS4B01G105100.1 Wheat mitochondrion, plastid 76.67 77.7
TraesCS4A01G211400.1 Wheat mitochondrion, plastid 75.33 76.35
TraesCS4D01G102000.1 Wheat mitochondrion, plastid 75.33 76.35
EES13808 Sorghum cytosol 71.33 73.79
Zm00001d032291_P001 Maize cytosol 70.0 72.92
HORVU4Hr1G017070.3 Barley cytosol 73.33 64.71
GSMUA_Achr3P04460_001 Banana cytosol 61.33 61.74
GSMUA_Achr4P01830_001 Banana cytosol 61.33 61.74
KRH43240 Soybean cytosol 60.67 59.48
KRH59402 Soybean cytosol 60.67 59.48
GSMUA_Achr3P07890_001 Banana cytosol, mitochondrion, plastid 58.67 59.06
Solyc04g054500.2.1 Tomato cytosol 58.67 57.89
VIT_07s0031g01160.t01 Wine grape cytosol 58.0 57.62
Os03t0383900-01 Rice cytosol 60.0 57.32
PGSC0003DMT400056666 Potato cytosol 58.0 57.24
Solyc05g051820.2.1 Tomato cytosol 58.67 57.14
PGSC0003DMT400056199 Potato cytosol 58.67 57.14
Bra011840.1-P Field mustard cytosol 58.0 55.06
CDY42647 Canola cytosol 58.0 55.06
CDY41999 Canola cytosol 58.0 55.06
CDX86196 Canola cytosol 58.0 55.06
AT4G39700.1 Thale cress cytosol 58.0 55.06
KRH31264 Soybean cytosol 55.33 53.55
KRG97609 Soybean cytosol 56.0 53.5
Os09t0364800-01 Rice cytosol, nucleus 39.33 52.68
Os04t0244800-01 Rice plasma membrane 50.0 48.39
Os03t0156600-01 Rice cytosol 49.33 47.74
Os01t0507700-01 Rice plasma membrane 47.33 47.02
Os01t0758000-00 Rice cytosol 30.67 30.07
Os03t0120400-01 Rice plastid 35.33 27.46
Os10t0537400-00 Rice cytosol 32.67 26.49
Os06t0542300-01 Rice cytosol 28.67 23.5
Protein Annotations
Gene3D:3.30.70.100MapMan:35.1EntrezGene:4345520ProteinID:BAC98695.1ProteinID:BAC99355.1ProteinID:BAF23676.1
ProteinID:BAT05353.1ProteinID:EAZ42667.1GO:GO:0003674GO:GO:0005488GO:GO:0005575GO:GO:0005622
GO:GO:0005623GO:GO:0005737GO:GO:0006810GO:GO:0008150GO:GO:0009987GO:GO:0019725
GO:GO:0030001GO:GO:0046872GO:GO:0046914GO:GO:0046916InterPro:HMA_domInterPro:HMA_dom_sf
InterPro:IPR006121EnsemblPlantsGene:Os08g0403300EnsemblPlants:Os08t0403300-00PFAM:PF00403PFscan:PS50846PANTHER:PTHR22814
PANTHER:PTHR22814:SF103UniProt:Q6Z273SUPFAM:SSF55008UniParc:UPI00001D6C18RefSeq:XP_015649087.1SEG:seg
Description
Heavy metal transport/detoxification protein domain containing protein. (Os08t0403300-00)
Coordinates
chr8:+:19244409..19245490
Molecular Weight (calculated)
16730.2 Da
IEP (calculated)
10.178
GRAVY (calculated)
-0.592
Length
150 amino acids
Sequence
(BLAST)
001: MGGTLHYLSD LLLGGSSGKT SHKKKRQFNT VELKVRMDCD GCELKVRNTL ANMKGVQSVE INRKQQKVTV QGMVDTQRVL RRAQSTGKRT ELWPYVPYTN
101: PYVAPPAAYD KKAPNGHIRR VDAVLPVTPS QEERLATLFS DDNPNACAVM
Best Arabidopsis Sequence Match ( AT4G39700.1 )
(BLAST)
001: MGVGGTLEYI SELIGNGGSH SYGKRKKKKQ FQTVELKVRM DCDGCVLKIK NSLSSLKGVK TVEINKKQQK VTVSGYADAS KVLKKAKATG KKAEIWPYVP
101: YNLVAQPYIA QAYDKKAPPG YVRKVDPNVT TGTMAVYYDD PSYTSLFSDD NPNACSIM
Arabidopsis Description
HIPP23Heavy metal-associated isoprenylated plant protein 23 [Source:UniProtKB/Swiss-Prot;Acc:O65657]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.