CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
plastid 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d032291_P001	Maize	cytosol	97.93	98.61
TraesCS4D01G102000.1	Wheat	mitochondrion, plastid	73.79	72.3
TraesCS4B01G105100.1	Wheat	mitochondrion, plastid	73.1	71.62
Os08t0403300-00	Rice	cytosol	73.79	71.33
TraesCS4A01G211400.1	Wheat	mitochondrion, plastid	72.41	70.95
GSMUA_Achr3P04460_001	Banana	cytosol	61.38	59.73
HORVU4Hr1G017070.3	Barley	cytosol	69.66	59.41
GSMUA_Achr4P01830_001	Banana	cytosol	60.0	58.39
EER96651	Sorghum	cytosol	64.14	57.76
GSMUA_Achr3P07890_001	Banana	cytosol, mitochondrion, plastid	57.24	55.7
KRH43240	Soybean	cytosol	57.24	54.25
KRH59402	Soybean	cytosol	57.24	54.25
EER99736	Sorghum	cytosol	62.76	54.17
Solyc04g054500.2.1	Tomato	cytosol	56.55	53.95
PGSC0003DMT400056666	Potato	cytosol	55.86	53.29
Solyc05g051820.2.1	Tomato	cytosol	56.55	53.25
VIT_07s0031g01160.t01	Wine grape	cytosol	55.17	52.98
PGSC0003DMT400056199	Potato	cytosol	55.86	52.6
KRG97609	Soybean	cytosol	54.48	50.32
KRH31264	Soybean	cytosol	52.41	49.03
CDY42647	Canola	cytosol	53.1	48.73
CDY41999	Canola	cytosol	53.1	48.73
CDX86196	Canola	cytosol	53.1	48.73
Bra011840.1-P	Field mustard	cytosol	53.1	48.73
AT4G39700.1	Thale cress	cytosol	51.72	47.47
EES11880	Sorghum	cytosol	48.97	45.81
EER92834	Sorghum	cytosol	47.59	44.23
EES14354	Sorghum	cytosol	43.45	41.72
KXG30743	Sorghum	plastid	43.45	35.59
OQU85626	Sorghum	mitochondrion	33.1	29.09
EES03638	Sorghum	cytosol	31.72	28.57
EER92967	Sorghum	plastid	34.48	25.77
KXG39011	Sorghum	cytosol	33.1	23.08
EER89887	Sorghum	cytosol	31.03	22.28

Protein Annotations

Gene3D:3.30.70.100	MapMan:35.1	EntrezGene:8070062	UniProt:C5YKS8	EnsemblPlants:EES13808	ProteinID:EES13808
ProteinID:EES13808.1	GO:GO:0003674	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0006810	GO:GO:0008150	GO:GO:0009987	GO:GO:0019725	GO:GO:0030001
GO:GO:0046872	GO:GO:0046914	GO:GO:0046916	InterPro:HMA_dom	InterPro:HMA_dom_sf	InterPro:IPR006121
PFAM:PF00403	PFscan:PS50846	PANTHER:PTHR22814	PANTHER:PTHR22814:SF103	EnsemblPlantsGene:SORBI_3007G123200	SUPFAM:SSF55008
UniParc:UPI0001A877E5	RefSeq:XP_002444313.1	:	:	:	:

Description

hypothetical protein

Coordinates

chr7:+:52802025..52806558

Molecular Weight (calculated)

16344.8 Da

IEP (calculated)

10.355

GRAVY (calculated)

-0.546

Length

145 amino acids

Sequence
(BLAST)

001: MGGVASELVG ASRERQSRKR KQFHTVELKV RMDCDGCELK VRNTLARMRG VESVEINRKQ QKVTVKGFVE AQRVLRRAQS TGKRVELWPY VPYTNLYVAP
101: PPVYDKRAPP GHIRRVDALI APAAGQEEHL ATLFSDDNPN ACSLM

Best Arabidopsis Sequence Match ( AT4G39700.1 )
(BLAST)

001: MGVGGTLEYI SELIGNGGSH SYGKRKKKKQ FQTVELKVRM DCDGCVLKIK NSLSSLKGVK TVEINKKQQK VTVSGYADAS KVLKKAKATG KKAEIWPYVP
101: YNLVAQPYIA QAYDKKAPPG YVRKVDPNVT TGTMAVYYDD PSYTSLFSDD NPNACSIM

Arabidopsis Description

HIPP23Heavy metal-associated isoprenylated plant protein 23 [Source:UniProtKB/Swiss-Prot;Acc:O65657]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.