Subcellular Localization
min:
: max
Winner_takes_all: plastid, mitochondrion
Predictor Summary:
Predictor Summary:
- mitochondrion 4
- plastid 2
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4B01G105100.1 | Wheat | mitochondrion, plastid | 97.97 | 97.97 |
| TraesCS4A01G211400.1 | Wheat | mitochondrion, plastid | 96.62 | 96.62 |
| HORVU4Hr1G017070.3 | Barley | cytosol | 88.51 | 77.06 |
| Os08t0403300-00 | Rice | cytosol | 76.35 | 75.33 |
| Zm00001d032291_P001 | Maize | cytosol | 72.3 | 74.31 |
| EES13808 | Sorghum | cytosol | 72.3 | 73.79 |
| GSMUA_Achr3P04460_001 | Banana | cytosol | 64.86 | 64.43 |
| TraesCS5D01G199500.1 | Wheat | cytosol | 68.24 | 63.12 |
| GSMUA_Achr4P01830_001 | Banana | cytosol | 62.16 | 61.74 |
| GSMUA_Achr3P07890_001 | Banana | cytosol, mitochondrion, plastid | 61.49 | 61.07 |
| KRH43240 | Soybean | cytosol | 58.11 | 56.21 |
| KRH59402 | Soybean | cytosol | 58.11 | 56.21 |
| VIT_07s0031g01160.t01 | Wine grape | cytosol | 56.08 | 54.97 |
| Solyc04g054500.2.1 | Tomato | cytosol | 54.73 | 53.29 |
| TraesCS2D01G168000.1 | Wheat | cytosol | 56.76 | 51.85 |
| PGSC0003DMT400056666 | Potato | cytosol | 52.7 | 51.32 |
| Solyc05g051820.2.1 | Tomato | cytosol | 53.38 | 51.3 |
| PGSC0003DMT400056199 | Potato | cytosol | 53.38 | 51.3 |
| KRG97609 | Soybean | cytosol | 52.03 | 49.04 |
| KRH31264 | Soybean | cytosol | 51.35 | 49.03 |
| Bra011840.1-P | Field mustard | cytosol | 52.03 | 48.73 |
| CDX86196 | Canola | cytosol | 52.03 | 48.73 |
| CDY41999 | Canola | cytosol | 52.03 | 48.73 |
| CDY42647 | Canola | cytosol | 52.03 | 48.73 |
| AT4G39700.1 | Thale cress | cytosol | 51.35 | 48.1 |
| TraesCS2D01G063000.1 | Wheat | cytosol, plastid | 49.32 | 47.1 |
| TraesCS5D01G250700.1 | Wheat | cytosol | 47.3 | 46.05 |
| TraesCS3D01G209500.1 | Wheat | cytosol | 46.62 | 45.7 |
| TraesCS2D01G285700.1 | Wheat | cytosol | 46.62 | 45.7 |
| TraesCS6D01G049600.1 | Wheat | cytosol | 45.27 | 42.14 |
| TraesCS7D01G379100.1 | Wheat | mitochondrion, plastid | 44.59 | 40.99 |
| TraesCS6D01G282300.1 | Wheat | cytosol, mitochondrion | 43.92 | 40.37 |
| TraesCS3D01G295000.1 | Wheat | cytosol | 30.41 | 30.41 |
| TraesCS6D01G240700.1 | Wheat | mitochondrion | 30.41 | 30.0 |
| TraesCS4D01G343300.1 | Wheat | plastid | 35.14 | 26.67 |
| TraesCS7D01G333800.1 | Wheat | cytosol | 29.05 | 25.15 |
| TraesCS1D01G204100.1 | Wheat | cytosol, plastid | 32.43 | 24.37 |
Protein Annotations
| Gene3D:3.30.70.100 | MapMan:35.1 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0006810 | GO:GO:0008150 |
| GO:GO:0030001 | GO:GO:0046872 | InterPro:HMA_dom | InterPro:HMA_dom_sf | InterPro:IPR006121 | PFAM:PF00403 |
| PFscan:PS50846 | PANTHER:PTHR22814 | PANTHER:PTHR22814:SF103 | SUPFAM:SSF55008 | EnsemblPlantsGene:TraesCS4D01G102000 | EnsemblPlants:TraesCS4D01G102000.1 |
| TIGR:cd00371 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr4D:-:80221136..80221662
Molecular Weight (calculated)
16721.3 Da
IEP (calculated)
10.546
GRAVY (calculated)
-0.593
Length
148 amino acids
Sequence
(BLAST)
(BLAST)
001: MGGTLRFLSD VLLGSSSQRQ HSKKRRQFNT VELKVKMDCD GCELKIRNTL ANMRGAQSVE INRKQHKVTV KGFVEPQRVL RRVQSTGKRA ELWPYVPYTN
101: PYMAPVYDKR APAGHVRKVE GVMPVSAGQE ERLATIFSDD NPNACSVM
101: PYMAPVYDKR APAGHVRKVE GVMPVSAGQE ERLATIFSDD NPNACSVM
001: MGALNYLSEY FSNHFYVSIR KRKKRKVMQT VNIKVKIDCD GCERKIKNAV SSIKGAKSVE VNRKMHKVTV SGYVDPKKVL KTVQSTGKKK AELWPYVPYT
101: MVAYPYAAGA YDKRAPPGFV RKSEQAQAQP GSTDDKLMSL FSDENPNACT VM
101: MVAYPYAAGA YDKRAPPGFV RKSEQAQAQP GSTDDKLMSL FSDENPNACT VM
Arabidopsis Description
HIPP22HIPP22 [Source:UniProtKB/TrEMBL;Acc:A0A178WF89]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.