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Wheat
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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid, mitochondrion

Predictor Summary:
  • mitochondrion 4
  • plastid 2
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:mitochondrion, plastid
Any Predictor:cytosol, mitochondrion, plastid
iPSORT:mitochondrion
MultiLoc:mitochondrion
Predotar:plastid
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:plastid
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
TraesCS2A01G313300.1
TraesCS2A01G586100.1
TraesCS2B01G332100.1
TraesCS2B01G596900.1
TraesCS2D01G311800.1
TraesCS2D01G600500.1
TraesCS6A01G198600.1
TraesCS6B01G230000.1
TraesCS6D01G184500.2

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT4G38580.1 TraesCS2A01G586100.1 AT4G27780.1 18823312
AT4G38580.1 TraesCS2B01G596900.1 AT4G27780.1 18823312
AT4G38580.1 TraesCS2D01G600500.1 AT4G27780.1 18823312
AT5G66110.1 TraesCS2A01G313300.1 AT1G54060.1 21798944
AT5G66110.1 TraesCS2B01G332100.1 AT1G54060.1 21798944
AT5G66110.1 TraesCS2D01G311800.1 AT1G54060.1 21798944
AT5G66110.1 TraesCS6A01G198600.1 AT1G54060.1 21798944
AT5G66110.1 TraesCS6B01G230000.1 AT1G54060.1 21798944
AT5G66110.1 TraesCS6D01G184500.2 AT1G54060.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS7A01G382700.1 Wheat mitochondrion, plastid 98.76 98.76
TraesCS7B01G285400.1 Wheat mitochondrion, plastid 98.14 98.14
HORVU7Hr1G090970.1 Barley mitochondrion 91.3 92.45
Os04t0244800-01 Rice plasma membrane 66.46 69.03
EES11880 Sorghum cytosol 66.46 69.03
TraesCS6D01G049600.1 Wheat cytosol 67.7 68.55
Zm00001d004138_P001 Maize cytosol 65.84 68.39
TraesCS2D01G063000.1 Wheat cytosol, plastid 65.84 68.39
GSMUA_Achr4P25770_001 Banana cytosol, plastid 59.01 61.29
VIT_03s0038g02440.t01 Wine grape cytosol 57.76 60.0
GSMUA_Achr1P02370_001 Banana cytosol, plastid 57.76 60.0
Bra009662.1-P Field mustard cytosol 44.1 58.68
VIT_04s0023g03910.t01 Wine grape cytosol 43.48 57.85
KRH60697 Soybean cytosol 55.28 57.79
Bra033570.1-P Field mustard cytosol 54.04 56.86
CDY65011 Canola cytosol 54.04 56.86
AT4G38580.1 Thale cress cytosol 53.42 56.21
CDY12089 Canola cytosol 53.42 56.21
Bra010738.1-P Field mustard cytosol 53.42 56.21
CDX90282 Canola cytosol 53.42 56.21
CDX72748 Canola cytosol 52.8 55.56
PGSC0003DMT400009390 Potato cytosol 54.66 55.35
CDX88005 Canola cytosol 49.69 55.17
CDY07874 Canola cytosol 49.69 55.17
Solyc02g083550.1.1 Tomato cytosol 54.04 54.72
KRH29001 Soybean cytosol 52.8 54.49
PGSC0003DMT400015784 Potato cytosol 51.55 54.25
Solyc01g111600.2.1 Tomato nucleus 51.55 54.25
VIT_04s0023g03890.t01 Wine grape cytosol 53.42 53.75
AT5G66110.1 Thale cress cytosol 49.07 53.74
Bra011581.1-P Field mustard cytosol 49.69 52.29
CDX69108 Canola cytosol 49.69 52.29
CDY52653 Canola cytosol 49.69 52.29
AT4G35060.1 Thale cress cytosol 48.45 50.98
CDX76309 Canola cytosol 47.83 50.0
Bra034669.1-P Field mustard cytosol 47.83 50.0
CDY17504 Canola cytosol 47.2 49.35
TraesCS2D01G285700.1 Wheat cytosol 42.86 45.7
TraesCS4D01G102000.1 Wheat mitochondrion, plastid 40.99 44.59
TraesCS3D01G209500.1 Wheat cytosol 41.61 44.37
TraesCS5D01G199500.1 Wheat cytosol 43.48 43.75
TraesCS5D01G250700.1 Wheat cytosol 40.99 43.42
KRH24318 Soybean cytosol, nucleus, plastid 22.98 43.02
TraesCS2D01G168000.1 Wheat cytosol 41.61 41.36
KRH28829 Soybean cytosol 27.95 37.19
TraesCS6D01G282300.1 Wheat cytosol, mitochondrion 34.78 34.78
TraesCS6D01G240700.1 Wheat mitochondrion 28.57 30.67
TraesCS3D01G295000.1 Wheat cytosol 27.95 30.41
TraesCS7D01G333800.1 Wheat cytosol 27.95 26.32
TraesCS4D01G343300.1 Wheat plastid 26.71 22.05
TraesCS1D01G204100.1 Wheat cytosol, plastid 26.09 21.32
Protein Annotations
EnsemblPlants:TraesCS7D01G379100.1EnsemblPlantsGene:TraesCS7D01G379100Gene3D:3.30.70.100GO:GO:0003674GO:GO:0005488GO:GO:0006810
GO:GO:0008150GO:GO:0030001GO:GO:0046872InterPro:HMA_domInterPro:HMA_dom_sfInterPro:IPR006121
PANTHER:PTHR22814PANTHER:PTHR22814:SF168PFAM:PF00403PFscan:PS50846SUPFAM:SSF55008TIGR:cd00371
MapMan:35.1:::::
Description
No Description!
Coordinates
chr7D:-:490880550..490881784
Molecular Weight (calculated)
17525.1 Da
IEP (calculated)
9.219
GRAVY (calculated)
-0.318
Length
161 amino acids
Sequence
(BLAST)
001: MGFLEALSGL CRSCPAPLTR GHLQKGRQLE TVEMKVRIDC EGCVSKIRKT LEGMDGVTGV DVVPRENRVT VTGYVDAAKV MRRVARKTGK RVEPWPYVPY
101: DVVAHPYAPG AYDRRAPAGY VRDVMANPGG ANASFVRATS TETRYTGAFS DENPNAACAI M
Best Arabidopsis Sequence Match ( AT4G38580.1 )
(BLAST)
001: MGVLDHVSEM FDCSHGHKIK KRKQLQTVEI KVKMDCEGCE RKVRRSVEGM KGVSSVTLEP KAHKVTVVGY VDPNKVVARM SHRTGKKVEL WPYVPYDVVA
101: HPYAAGVYDK KAPSGYVRRV DDPGVSQLAR ASSTEVRYTT AFSDENPAAC VVM
Arabidopsis Description
HIPP26HIPP26 [Source:UniProtKB/TrEMBL;Acc:A0A178V1F5]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.