Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5B01G191700.1 | Wheat | cytosol | 99.38 | 98.76 |
| TraesCS5A01G191400.1 | Wheat | cytosol | 98.75 | 98.75 |
| HORVU5Hr1G057730.1 | Barley | cytosol | 98.75 | 98.14 |
| Zm00001d020257_P001 | Maize | cytosol | 86.25 | 85.19 |
| EER96651 | Sorghum | cytosol | 85.62 | 85.09 |
| GSMUA_Achr4P01830_001 | Banana | cytosol | 74.38 | 79.87 |
| Zm00001d005656_P001 | Maize | mitochondrion | 78.12 | 77.64 |
| Os09t0364800-01 | Rice | cytosol, nucleus | 52.5 | 75.0 |
| GSMUA_Achr3P04460_001 | Banana | cytosol | 69.38 | 74.5 |
| GSMUA_Achr3P07890_001 | Banana | cytosol, mitochondrion, plastid | 69.38 | 74.5 |
| KRH43240 | Soybean | cytosol | 68.12 | 71.24 |
| KRH59402 | Soybean | cytosol | 67.5 | 70.59 |
| Solyc04g054500.2.1 | Tomato | cytosol | 65.62 | 69.08 |
| Bra011840.1-P | Field mustard | cytosol | 68.12 | 68.99 |
| CDX86196 | Canola | cytosol | 68.12 | 68.99 |
| CDY41999 | Canola | cytosol | 68.12 | 68.99 |
| CDY42647 | Canola | cytosol | 68.12 | 68.99 |
| TraesCS4D01G102000.1 | Wheat | mitochondrion, plastid | 63.12 | 68.24 |
| AT4G39700.1 | Thale cress | cytosol | 66.25 | 67.09 |
| VIT_07s0031g01160.t01 | Wine grape | cytosol | 63.12 | 66.89 |
| PGSC0003DMT400056666 | Potato | cytosol | 62.5 | 65.79 |
| KRH31264 | Soybean | cytosol | 63.12 | 65.16 |
| KRG97609 | Soybean | cytosol | 61.25 | 62.42 |
| PGSC0003DMT400056199 | Potato | cytosol | 60.0 | 62.34 |
| Solyc05g051820.2.1 | Tomato | cytosol | 60.0 | 62.34 |
| TraesCS2D01G168000.1 | Wheat | cytosol | 62.5 | 61.73 |
| TraesCS2D01G063000.1 | Wheat | cytosol, plastid | 53.75 | 55.48 |
| TraesCS2D01G285700.1 | Wheat | cytosol | 46.25 | 49.01 |
| TraesCS5D01G250700.1 | Wheat | cytosol | 46.25 | 48.68 |
| TraesCS6D01G049600.1 | Wheat | cytosol | 48.12 | 48.43 |
| TraesCS3D01G209500.1 | Wheat | cytosol | 45.0 | 47.68 |
| TraesCS6D01G282300.1 | Wheat | cytosol, mitochondrion | 44.38 | 44.1 |
| TraesCS7D01G379100.1 | Wheat | mitochondrion, plastid | 43.75 | 43.48 |
| TraesCS3D01G295000.1 | Wheat | cytosol | 30.0 | 32.43 |
| TraesCS6D01G240700.1 | Wheat | mitochondrion | 29.38 | 31.33 |
| TraesCS4D01G343300.1 | Wheat | plastid | 35.0 | 28.72 |
| TraesCS7D01G333800.1 | Wheat | cytosol | 28.75 | 26.9 |
| TraesCS1D01G204100.1 | Wheat | cytosol, plastid | 30.62 | 24.87 |
Protein Annotations
| EnsemblPlants:TraesCS5D01G199500.1 | EnsemblPlantsGene:TraesCS5D01G199500 | Gene3D:3.30.70.100 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0006810 |
| GO:GO:0008150 | GO:GO:0030001 | GO:GO:0046872 | InterPro:HMA_dom | InterPro:HMA_dom_sf | InterPro:IPR006121 |
| PANTHER:PTHR22814 | PANTHER:PTHR22814:SF165 | PFAM:PF00403 | PFscan:PS50846 | SEG:seg | SUPFAM:SSF55008 |
| TIGR:cd00371 | MapMan:35.1 | : | : | : | : |
Description
No Description!
Coordinates
chr5D:+:302104581..302105667
Molecular Weight (calculated)
17749.5 Da
IEP (calculated)
10.007
GRAVY (calculated)
-0.540
Length
160 amino acids
Sequence
(BLAST)
(BLAST)
001: MGVGGTLDYL SELLGGGGRR RSYKQKRKQF QTVELKVRMD CDGCELKVRN ALSSMKGVQS VEINRKQYKV TVQGFVEPHK VVKRVQTTGK KAEIWPYIPY
101: NLVAHPYAAQ TYDKKAPPGY VRKVDAVMPV ASYGGPGAGA QEERLTTMFS DDNPNACSVM
101: NLVAHPYAAQ TYDKKAPPGY VRKVDAVMPV ASYGGPGAGA QEERLTTMFS DDNPNACSVM
001: MGVGGTLEYI SELIGNGGSH SYGKRKKKKQ FQTVELKVRM DCDGCVLKIK NSLSSLKGVK TVEINKKQQK VTVSGYADAS KVLKKAKATG KKAEIWPYVP
101: YNLVAQPYIA QAYDKKAPPG YVRKVDPNVT TGTMAVYYDD PSYTSLFSDD NPNACSIM
101: YNLVAQPYIA QAYDKKAPPG YVRKVDPNVT TGTMAVYYDD PSYTSLFSDD NPNACSIM
Arabidopsis Description
HIPP23Heavy metal-associated isoprenylated plant protein 23 [Source:UniProtKB/Swiss-Prot;Acc:O65657]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.