CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
plasma membrane 1
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH31264	Soybean	cytosol	91.72	92.9
KRH43240	Soybean	cytosol	74.52	76.47
KRH59402	Soybean	cytosol	74.52	76.47
VIT_07s0031g01160.t01	Wine grape	cytosol	72.61	75.5
Bra011840.1-P	Field mustard	cytosol	71.97	71.52
CDY41999	Canola	cytosol	71.97	71.52
Solyc04g054500.2.1	Tomato	cytosol	68.79	71.05
CDX86196	Canola	cytosol	71.34	70.89
CDY42647	Canola	cytosol	71.34	70.89
PGSC0003DMT400056666	Potato	cytosol	67.52	69.74
Solyc05g051820.2.1	Tomato	cytosol	67.52	68.83
AT4G39700.1	Thale cress	cytosol	68.79	68.35
PGSC0003DMT400056199	Potato	cytosol	66.88	68.18
GSMUA_Achr4P01830_001	Banana	cytosol	63.69	67.11
GSMUA_Achr10P...	Banana	cytosol	57.32	61.64
HORVU5Hr1G057730.1	Barley	cytosol	63.06	61.49
TraesCS5D01G199500.1	Wheat	cytosol	62.42	61.25
KRH62410	Soybean	cytosol, plastid	57.96	61.07
GSMUA_Achr3P04460_001	Banana	cytosol	57.96	61.07
TraesCS5B01G191700.1	Wheat	cytosol	62.42	60.87
EER96651	Sorghum	cytosol	62.42	60.87
TraesCS5A01G191400.1	Wheat	cytosol	61.78	60.62
GSMUA_Achr3P07890_001	Banana	cytosol, mitochondrion, plastid	57.32	60.4
EER99736	Sorghum	cytosol	64.33	60.12
KRH53129	Soybean	cytosol	56.69	59.73
Zm00001d020257_P001	Maize	cytosol	61.15	59.26
GSMUA_Achr7P11680_001	Banana	cytosol	55.41	58.39
Zm00001d005656_P001	Maize	mitochondrion	57.96	56.52
Os03t0383900-01	Rice	cytosol	56.05	56.05
Os08t0403300-00	Rice	cytosol	53.5	56.0
KRH35768	Soybean	cytosol, plastid	51.59	55.48
TraesCS2B01G186900.1	Wheat	cytosol	56.69	54.94
TraesCS2D01G168000.1	Wheat	cytosol	56.69	54.94
Zm00001d032291_P001	Maize	cytosol	50.32	54.86
EES13808	Sorghum	cytosol	50.32	54.48
KRG90986	Soybean	cytosol, plastid	50.32	54.11
KRH38224	Soybean	cytosol	50.32	53.74
TraesCS2A01G160700.1	Wheat	cytosol	55.41	53.7
KRH60697	Soybean	cytosol	51.59	52.6
TraesCS4D01G102000.1	Wheat	mitochondrion, plastid	49.04	52.03
TraesCS4A01G211400.1	Wheat	mitochondrion, plastid	48.41	51.35
TraesCS4B01G105100.1	Wheat	mitochondrion, plastid	48.41	51.35
Os09t0364800-01	Rice	cytosol, nucleus	36.31	50.89
KRH01671	Soybean	cytosol	46.5	50.34
KRG93769	Soybean	cytosol	29.94	48.45
KRH70455	Soybean	cytosol	44.59	48.28
KRG93169	Soybean	cytosol	43.95	47.92
KRH29001	Soybean	cytosol	47.13	47.44
KRG93786	Soybean	cytosol, plastid	28.66	46.39
KRH15973	Soybean	cytosol, plastid	31.85	45.87
KRH76245	Soybean	cytosol	24.84	44.32
HORVU4Hr1G017070.3	Barley	cytosol	47.13	43.53
KRH24318	Soybean	cytosol, nucleus, plastid	23.57	43.02
KRH38229	Soybean	cytosol	38.85	41.5
KRH28829	Soybean	cytosol	30.57	39.67
KRH38480	Soybean	cytosol	28.66	37.82
KRH09015	Soybean	cytosol	32.48	36.96
KRH57823	Soybean	cytosol	33.12	35.14
KRH58951	Soybean	cytosol	31.21	35.0
KRH22286	Soybean	cytosol	29.3	32.39
KRH27043	Soybean	cytosol	29.3	32.39
KRH34236	Soybean	cytosol	33.76	29.78
KRG92555	Soybean	cytosol	32.48	28.65

Protein Annotations

EntrezGene:100780586	Gene3D:3.30.70.100	MapMan:35.1	EMBL:ACUP02010803	EnsemblPlantsGene:GLYMA_18G019300	GO:GO:0003674
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006810
GO:GO:0008150	GO:GO:0009987	GO:GO:0019725	GO:GO:0030001	GO:GO:0046872	GO:GO:0046914
GO:GO:0046916	InterPro:HMA_dom	InterPro:HMA_dom_sf	UniProt:I1MYU7	InterPro:IPR006121	EnsemblPlants:KRG97609
ProteinID:KRG97609	ProteinID:KRG97609.1	PFAM:PF00403	PFscan:PS50846	PANTHER:PTHR22814	PANTHER:PTHR22814:SF171
SUPFAM:SSF55008	UniParc:UPI000233ECA2	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr18:-:1423555..1424821

Molecular Weight (calculated)

17391.8 Da

IEP (calculated)

9.494

GRAVY (calculated)

-0.596

Length

157 amino acids

Sequence
(BLAST)

001: MGVGDYWSDL MGSGNGNHQH NNKNKNKKQL QTVELKVMMD CDGCVLKVRK TLSSLDGVES VEINRKQQKV TVTGYVEPNK VLKKAKSTGK KAEIWPYVPF
101: NMVANPYTVQ AYDKKAPPGY VRRVDNSAAT IGTVTTAYAD SYTTMFSDEN PNACSIM

Best Arabidopsis Sequence Match ( AT1G22990.1 )
(BLAST)

001: MGALNYLSEY FSNHFYVSIR KRKKRKVMQT VNIKVKIDCD GCERKIKNAV SSIKGAKSVE VNRKMHKVTV SGYVDPKKVL KTVQSTGKKK AELWPYVPYT
101: MVAYPYAAGA YDKRAPPGFV RKSEQAQAQP GSTDDKLMSL FSDENPNACT VM

Arabidopsis Description

HIPP22HIPP22 [Source:UniProtKB/TrEMBL;Acc:A0A178WF89]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.