CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

nucleus 1
plastid 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH53129	Soybean	cytosol	95.3	95.3
AT4G08570.1	Thale cress	cytosol	77.85	77.33
CDX75144	Canola	cytosol	63.76	75.4
Bra037865.1-P	Field mustard	cytosol	75.17	74.67
CDY36193	Canola	cytosol	74.5	74.0
Solyc04g072700.2.1	Tomato	cytosol, plastid	71.14	70.67
PGSC0003DMT400024481	Potato	cytosol, plastid	71.14	70.67
PGSC0003DMT400024479	Potato	cytosol, plastid	71.14	70.67
VIT_18s0001g04800.t01	Wine grape	cytosol, plastid	63.09	63.09
KRH59402	Soybean	cytosol	63.76	62.09
KRH43240	Soybean	cytosol	63.76	62.09
KRH31264	Soybean	cytosol	62.42	60.0
KRG97609	Soybean	cytosol	61.07	57.96
KRH35768	Soybean	cytosol, plastid	50.34	51.37
KRG90986	Soybean	cytosol, plastid	49.66	50.68
KRH38224	Soybean	cytosol	48.32	48.98
KRG93769	Soybean	cytosol	30.87	47.42
KRH60697	Soybean	cytosol	48.99	47.4
KRH29001	Soybean	cytosol	48.99	46.79
KRG93786	Soybean	cytosol, plastid	30.2	46.39
KRG93169	Soybean	cytosol	44.3	45.83
KRH76245	Soybean	cytosol	26.85	45.45
KRH24318	Soybean	cytosol, nucleus, plastid	25.5	44.19
KRH01671	Soybean	cytosol	42.95	44.14
KRH70455	Soybean	cytosol	42.28	43.45
KRH15973	Soybean	cytosol, plastid	31.54	43.12
KRH28829	Soybean	cytosol	34.9	42.98
KRH38229	Soybean	cytosol	41.61	42.18
KRH38480	Soybean	cytosol	28.19	35.29
KRH09015	Soybean	cytosol	32.21	34.78
KRH58951	Soybean	cytosol	29.53	31.43
KRH57823	Soybean	cytosol	30.87	31.08
KRH27043	Soybean	cytosol	29.53	30.99
KRH22286	Soybean	cytosol	29.53	30.99
KRH34236	Soybean	cytosol	36.24	30.34
KRG92555	Soybean	cytosol	34.9	29.21

Protein Annotations

EntrezGene:100782955	Gene3D:3.30.70.100	MapMan:35.1	EMBL:ACUP02002269	EnsemblPlantsGene:GLYMA_04G106500	GO:GO:0003674
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006810
GO:GO:0008150	GO:GO:0009987	GO:GO:0019725	GO:GO:0030001	GO:GO:0046872	GO:GO:0046914
GO:GO:0046916	InterPro:HMA_dom	InterPro:HMA_dom_sf	UniProt:I1JVJ2	InterPro:IPR006121	EnsemblPlants:KRH62410
ProteinID:KRH62410	ProteinID:KRH62410.1	PFAM:PF00403	PFscan:PS50846	PANTHER:PTHR22814	PANTHER:PTHR22814:SF84
SUPFAM:SSF55008	UniParc:UPI0002339AC6	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr4:-:11186002..11186964

Molecular Weight (calculated)

16702.4 Da

IEP (calculated)

10.164

GRAVY (calculated)

-0.546

Length

149 amino acids

Sequence
(BLAST)

001: MGVQGPLEYL SDLLSTKKKK KKKQVQTVAL KIRMDCEGCA RKVKHVLSGV KGAKSVEVDL KQQKATVTGY VEPKKVLKAA QSTKKKVELW PYVPYTMVAN
101: PYISQAYDKK APPNMVRKVS DTTNISETTV DDRYIQMFSD ENPNACSIM

Best Arabidopsis Sequence Match ( AT4G08570.1 )
(BLAST)

001: MGVEGTMEYI SDLLKKRKRK KKKQMQTVAL RVARIDCEGC ERKIKHVLSG VKGVKSVDVD VKLQKVTVTG YIDPKKVLEA AKSTKKKVEL WPYVPYTMVA
101: NPYISQAYDK KAPPNMVRKV PDTASVNETT VDDSYTIMFS DENPNSCAIM

Arabidopsis Description

HIPP24Heavy metal-associated isoprenylated plant protein 24 [Source:UniProtKB/Swiss-Prot;Acc:O81464]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.