CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
cytosol 2
nucleus 1
mitochondrion 1
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plastid
Any Predictor:	cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:	secretory
MultiLoc:	cytosol
Plant-mPloc:	nucleus
Predotar:	plastid
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG90986	Soybean	cytosol, plastid	97.26	97.26
KRH38224	Soybean	cytosol	84.25	83.67
Solyc04g007630.1.1	Tomato	cytosol	68.49	68.03
PGSC0003DMT400015350	Potato	cytosol	67.81	67.35
KRG93769	Soybean	cytosol	44.52	67.01
GSMUA_Achr2P07910_001	Banana	cytosol	69.18	66.89
KRG93786	Soybean	cytosol, plastid	43.15	64.95
KRH76245	Soybean	cytosol	37.67	62.5
KRG93169	Soybean	cytosol	61.64	62.5
GSMUA_Achr1P12840_001	Banana	cytosol	64.38	62.25
KRH15973	Soybean	cytosol, plastid	45.21	60.55
KRH70455	Soybean	cytosol	59.59	60.0
KRH01671	Soybean	cytosol	58.22	58.62
KRH43240	Soybean	cytosol	60.96	58.17
KRH59402	Soybean	cytosol	60.27	57.52
KRH29001	Soybean	cytosol	57.53	53.85
KRH24318	Soybean	cytosol, nucleus, plastid	31.51	53.49
KRH60697	Soybean	cytosol	55.48	52.6
KRH38229	Soybean	cytosol	52.74	52.38
KRH31264	Soybean	cytosol	55.48	52.26
KRG97609	Soybean	cytosol	55.48	51.59
KRH62410	Soybean	cytosol, plastid	51.37	50.34
KRH53129	Soybean	cytosol	50.0	48.99
KRH28829	Soybean	cytosol	36.3	43.8
KRH58951	Soybean	cytosol	36.99	38.57
KRH09015	Soybean	cytosol	33.56	35.51
KRH38480	Soybean	cytosol	28.77	35.29
KRH27043	Soybean	cytosol	32.88	33.8
KRH22286	Soybean	cytosol	32.88	33.8
KRH57823	Soybean	cytosol	34.25	33.78
KRH34236	Soybean	cytosol	41.1	33.71
KRG92555	Soybean	cytosol	39.73	32.58

Protein Annotations

EntrezGene:100785059	Gene3D:3.30.70.100	MapMan:35.1	EMBL:ACUP02006703	EnsemblPlantsGene:GLYMA_10G264100	GO:GO:0003674
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006810
GO:GO:0008150	GO:GO:0009987	GO:GO:0019725	GO:GO:0030001	GO:GO:0046872	GO:GO:0046914
GO:GO:0046916	InterPro:HMA_dom	InterPro:HMA_dom_sf	UniProt:I1LEL3	InterPro:IPR006121	EnsemblPlants:KRH35768
ProteinID:KRH35768	ProteinID:KRH35768.1	PFAM:PF00403	PFscan:PS50846	PANTHER:PTHR22814	PANTHER:PTHR22814:SF47
SUPFAM:SSF55008	UniParc:UPI000233CF5E	:	:	:	:

Description

hypothetical protein

Coordinates

chr10:-:48845508..48847036

Molecular Weight (calculated)

16539.8 Da

IEP (calculated)

9.917

GRAVY (calculated)

-0.673

Length

146 amino acids

Sequence
(BLAST)

001: MGALDFLSDY FSVSTPKKKR KPMQTVEIKV KMDCDGCERR VRNSVSNMSG VKQVEVNRKQ SKVTVTGYVD RNKVLKKVQS TGKRAEFWPY IQYNLVAYPY
101: VVQAYDKKAP SGYVKNTEQA LPNPNAPDEK LTSLFSDDNP NACSIM

Best Arabidopsis Sequence Match ( AT1G71050.1 )
(BLAST)

001: MGALDSLSEY ISDYFRVTRK RRKRKVMQTV NIKVKMDCDG CERRVKNAVS SMKGVKSVEV NRKIHKVTVS GYVEPKKVLK RIERTGKKAE IWPYVPYNMV
101: AYPYAVGTYD KKAPAGYVRK SEQSQLQLLP GAPENHYISL FSDENPNACT VM

Arabidopsis Description

HIPP20HIPP20 [Source:UniProtKB/TrEMBL;Acc:A0A178W5Y0]
SUBAcon: [plastid,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.