CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
plastid 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG90986	Soybean	cytosol, plastid	53.06	53.42
GSMUA_Achr2P07910_001	Banana	cytosol	54.42	52.98
KRH35768	Soybean	cytosol, plastid	52.38	52.74
VIT_01s0011g04700.t01	Wine grape	cytosol	52.38	52.38
KRH38224	Soybean	cytosol	52.38	52.38
KRG93769	Soybean	cytosol	33.33	50.52
GSMUA_Achr1P12840_001	Banana	cytosol	51.02	49.67
KRG93786	Soybean	cytosol, plastid	32.65	49.48
KRG93169	Soybean	cytosol	48.3	49.31
KRH60697	Soybean	cytosol	50.34	48.05
KRH76245	Soybean	cytosol	28.57	47.73
KRH29001	Soybean	cytosol	50.34	47.44
KRH15973	Soybean	cytosol, plastid	34.69	46.79
KRH24318	Soybean	cytosol, nucleus, plastid	27.21	46.51
KRH01671	Soybean	cytosol	45.58	46.21
KRH43240	Soybean	cytosol	47.62	45.75
KRH70455	Soybean	cytosol	44.9	45.52
KRH59402	Soybean	cytosol	46.94	45.1
KRH62410	Soybean	cytosol, plastid	42.18	41.61
KRH53129	Soybean	cytosol	41.5	40.94
KRH31264	Soybean	cytosol	42.86	40.65
KRG97609	Soybean	cytosol	41.5	38.85
KRH28829	Soybean	cytosol	31.29	38.02
KRH58951	Soybean	cytosol	33.33	35.0
KRH27043	Soybean	cytosol	31.29	32.39
KRH57823	Soybean	cytosol	31.97	31.76
KRH22286	Soybean	cytosol	30.61	31.69
KRH09015	Soybean	cytosol	29.25	31.16
KRH38480	Soybean	cytosol	23.81	29.41
KRH34236	Soybean	cytosol	31.97	26.4
KRG92555	Soybean	cytosol	31.29	25.84

Protein Annotations

EntrezGene:100527442	Gene3D:3.30.70.100	MapMan:35.1	EMBL:ACUP02005763	EMBL:BT092285	UniProt:C6T4C4
EnsemblPlantsGene:GLYMA_09G120000	GO:GO:0003674	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0006810	GO:GO:0008150	GO:GO:0009987	GO:GO:0019725	GO:GO:0030001
GO:GO:0046872	GO:GO:0046914	GO:GO:0046916	InterPro:HMA_dom	InterPro:HMA_dom_sf	InterPro:IPR006121
EnsemblPlants:KRH38229	ProteinID:KRH38229	ProteinID:KRH38229.1	PFAM:PF00403	PFscan:PS50846	PANTHER:PTHR22814
PANTHER:PTHR22814:SF110	SUPFAM:SSF55008	UniParc:UPI0001B158E3	:	:	:

Description

hypothetical protein

Coordinates

chr9:-:28731271..28733771

Molecular Weight (calculated)

16640.0 Da

IEP (calculated)

5.341

GRAVY (calculated)

-0.490

Length

147 amino acids

Sequence
(BLAST)

001: MGFLDNLQEW FTACTKPKEK LVPKKTVNVR VKMDCEGCER KVKNAVKDLE GVESYDVNRK LQRVSVTGYV DSEEVLEEVR NTGKTADLWP FVPYDLVAFP
101: YVKGAYDIKA PSGFVRNVPD AMGDPKSPEM KLMRAFDDDN PHACSIM

Best Arabidopsis Sequence Match ( AT1G22990.1 )
(BLAST)

001: MGALNYLSEY FSNHFYVSIR KRKKRKVMQT VNIKVKIDCD GCERKIKNAV SSIKGAKSVE VNRKMHKVTV SGYVDPKKVL KTVQSTGKKK AELWPYVPYT
101: MVAYPYAAGA YDKRAPPGFV RKSEQAQAQP GSTDDKLMSL FSDENPNACT VM

Arabidopsis Description

HIPP22HIPP22 [Source:UniProtKB/TrEMBL;Acc:A0A178WF89]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.