CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc02g076880.2.1	Tomato	cytosol	65.71	64.34
VIT_10s0003g01220.t01	Wine grape	cytosol	64.29	62.07
KRH22286	Soybean	cytosol	60.71	59.86
KRH27043	Soybean	cytosol	60.71	59.86
PGSC0003DMT400026532	Potato	cytosol	45.71	59.26
KRH57823	Soybean	cytosol	46.43	43.92
KRH38480	Soybean	cytosol	35.0	41.18
KRH09015	Soybean	cytosol	40.0	40.58
KRH35768	Soybean	cytosol, plastid	38.57	36.99
KRG90986	Soybean	cytosol, plastid	37.86	36.3
KRH59402	Soybean	cytosol	39.29	35.95
KRH43240	Soybean	cytosol	39.29	35.95
KRH70455	Soybean	cytosol	37.14	35.86
KRH01671	Soybean	cytosol	37.14	35.86
KRH38224	Soybean	cytosol	37.14	35.37
KRH34236	Soybean	cytosol	44.29	34.83
KRG92555	Soybean	cytosol	42.86	33.71
KRH38229	Soybean	cytosol	35.0	33.33
KRH31264	Soybean	cytosol	36.43	32.9
KRG97609	Soybean	cytosol	35.0	31.21
KRG93769	Soybean	cytosol	21.43	30.93
KRH28829	Soybean	cytosol	26.43	30.58
KRG93169	Soybean	cytosol	31.43	30.56
KRH15973	Soybean	cytosol, plastid	23.57	30.28
KRH29001	Soybean	cytosol	33.57	30.13
KRG93786	Soybean	cytosol, plastid	20.71	29.9
KRH62410	Soybean	cytosol, plastid	31.43	29.53
KRH60697	Soybean	cytosol	32.14	29.22
KRH53129	Soybean	cytosol	30.71	28.86
KRH76245	Soybean	cytosol	17.86	28.41
KRH24318	Soybean	cytosol, nucleus, plastid	17.14	27.91

Protein Annotations

EntrezGene:100805973	Gene3D:3.30.70.100	MapMan:35.1	EMBL:ACUP02003295	EnsemblPlantsGene:GLYMA_05G157900	GO:GO:0003674
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006810
GO:GO:0008150	GO:GO:0009987	GO:GO:0019725	GO:GO:0030001	GO:GO:0046872	GO:GO:0046914
GO:GO:0046916	InterPro:HMA_dom	InterPro:HMA_dom_sf	UniProt:I1K3Y5	InterPro:IPR006121	EnsemblPlants:KRH58951
ProteinID:KRH58951	ProteinID:KRH58951.1	PFAM:PF00403	PFscan:PS50846	PANTHER:PTHR22814	PANTHER:PTHR22814:SF112
SUPFAM:SSF55008	UniParc:UPI00023C42AC	:	:	:	:

Description

hypothetical protein

Coordinates

chr5:+:35008421..35010378

Molecular Weight (calculated)

16076.3 Da

IEP (calculated)

8.809

GRAVY (calculated)

-0.603

Length

140 amino acids

Sequence
(BLAST)

001: MTIVEMCVHM DCPGCETKIK KALKKLRGVD DVDIDMRMQK VTVMGWADQK KVLKTVRKTG RRAELWPYPY NPEYHALARH YGNGNYFASA KPSSSYNYYK
101: HGYSYGEDFG YYHKPIGAAI IDEKAMSMFS DDNPHACSIM

Best Arabidopsis Sequence Match ( AT1G06330.1 )
(BLAST)

001: MTTIEMRVHM DCVGCESRVK NALQKMRGVD AVEIDMVQQK VTVTGYADQK KVLKKVRKTG RRAELWQLPY NPDHMGGSSS NGGYFYNPQG CNGPINHAAP
101: VPTSSYNYYK HGYDSNDYSS YRHHPVHASI FSHQTGSKFS DENPNACSIM

Arabidopsis Description

Heavy metal transport/detoxification superfamily protein [Source:TAIR;Acc:AT1G06330]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.