CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 4
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_03s0038g02440.t01	Wine grape	cytosol	83.77	83.23
KRH29001	Soybean	cytosol	83.12	82.05
PGSC0003DMT400015784	Potato	cytosol	79.22	79.74
Solyc01g111600.2.1	Tomato	nucleus	78.57	79.08
Bra011581.1-P	Field mustard	cytosol	75.32	75.82
CDX69108	Canola	cytosol	75.32	75.82
CDY52653	Canola	cytosol	75.32	75.82
AT4G35060.1	Thale cress	cytosol	75.32	75.82
KRH24318	Soybean	cytosol, nucleus, plastid	42.21	75.58
Bra034669.1-P	Field mustard	cytosol	74.68	74.68
CDX76309	Canola	cytosol	74.68	74.68
CDY17504	Canola	cytosol	74.03	74.03
GSMUA_Achr4P25770_001	Banana	cytosol, plastid	72.73	72.26
GSMUA_Achr1P02370_001	Banana	cytosol, plastid	69.48	69.03
Zm00001d004138_P001	Maize	cytosol	67.53	67.1
EES11880	Sorghum	cytosol	66.88	66.45
Os04t0244800-01	Rice	plasma membrane	66.88	66.45
TraesCS2B01G077100.1	Wheat	cytosol, plastid	65.58	65.16
TraesCS2D01G063000.1	Wheat	cytosol, plastid	65.58	65.16
TraesCS2A01G064900.1	Wheat	nucleus	65.58	65.16
Os03t0156600-01	Rice	cytosol	64.29	63.87
TraesCS6D01G049600.1	Wheat	cytosol	62.99	61.01
TraesCS6A01G043000.1	Wheat	cytosol	62.99	61.01
TraesCS6B01G059000.1	Wheat	cytosol	62.99	61.01
Zm00001d027720_P001	Maize	cytosol	61.69	60.9
EER92834	Sorghum	cytosol	61.69	60.9
HORVU7Hr1G090970.1	Barley	mitochondrion	58.44	56.6
TraesCS7A01G382700.1	Wheat	mitochondrion, plastid	59.09	56.52
TraesCS7B01G285400.1	Wheat	mitochondrion, plastid	59.09	56.52
KRH38224	Soybean	cytosol	53.9	56.46
KRH35768	Soybean	cytosol, plastid	52.6	55.48
TraesCS7D01G379100.1	Wheat	mitochondrion, plastid	57.79	55.28
KRG90986	Soybean	cytosol, plastid	51.95	54.79
KRH01671	Soybean	cytosol	51.3	54.48
TraesCS5D01G250700.1	Wheat	cytosol	53.25	53.95
TraesCS5B01G242000.1	Wheat	cytosol	53.25	53.95
TraesCS5A01G244000.1	Wheat	cytosol	53.25	53.95
HORVU5Hr1G069380.2	Barley	cytosol	53.25	53.95
KRH43240	Soybean	cytosol	52.6	52.94
KRH59402	Soybean	cytosol	51.95	52.29
KRH70455	Soybean	cytosol	48.7	51.72
EES14354	Sorghum	cytosol	50.65	51.66
Os01t0507700-01	Rice	plasma membrane	50.65	51.66
KRH31264	Soybean	cytosol	51.95	51.61
KRG97609	Soybean	cytosol	52.6	51.59
TraesCS2D01G285700.1	Wheat	cytosol	50.0	50.99
TraesCS2A01G287200.1	Wheat	cytosol	50.0	50.99
Zm00001d034978_P001	Maize	cytosol	50.0	50.99
TraesCS2B01G304100.1	Wheat	cytosol	50.0	50.99
KRH38229	Soybean	cytosol	48.05	50.34
TraesCS3A01G206100.1	Wheat	cytosol	49.35	50.33
KRG93169	Soybean	cytosol	46.75	50.0
TraesCS3D01G209500.1	Wheat	cytosol	48.7	49.67
Zm00001d052760_P001	Maize	cytosol	48.7	49.67
HORVU3Hr1G049780.1	Barley	cytosol	48.7	49.67
KRG93769	Soybean	cytosol	31.17	49.48
KRH62410	Soybean	cytosol, plastid	47.4	48.99
KRG93786	Soybean	cytosol, plastid	30.52	48.45
KRH53129	Soybean	cytosol	46.75	48.32
KRH76245	Soybean	cytosol	27.27	47.73
KRH15973	Soybean	cytosol, plastid	32.47	45.87
HORVU6Hr1G009000.1	Barley	cytosol, plastid, vacuole	61.69	42.22
TraesCS3B01G238100.1	Wheat	cytosol	27.27	42.0
KRH28829	Soybean	cytosol	31.17	39.67
KRH09015	Soybean	cytosol	34.42	38.41
KRH38480	Soybean	cytosol	29.22	37.82
KRH57823	Soybean	cytosol	32.47	33.78
KRH58951	Soybean	cytosol	29.22	32.14
KRH27043	Soybean	cytosol	29.22	31.69
KRH22286	Soybean	cytosol	29.22	31.69
HORVU2Hr1G011060.1	Barley	nucleus, plastid	30.52	30.32
KRH34236	Soybean	cytosol	32.47	28.09
KRG92555	Soybean	cytosol	31.82	27.53

Protein Annotations

EntrezGene:100780624	Gene3D:3.30.70.100	MapMan:35.1	EMBL:ACUP02002135	EnsemblPlantsGene:GLYMA_04G003700	GO:GO:0003674
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006810
GO:GO:0008150	GO:GO:0009987	GO:GO:0019725	GO:GO:0030001	GO:GO:0046872	GO:GO:0046914
GO:GO:0046916	InterPro:HMA_dom	InterPro:HMA_dom_sf	UniProt:I1JSE0	InterPro:IPR006121	EnsemblPlants:KRH60697
ProteinID:KRH60697	ProteinID:KRH60697.1	ProteinID:KRH60698.1	PFAM:PF00403	PFscan:PS50846	PANTHER:PTHR22814
PANTHER:PTHR22814:SF155	SUPFAM:SSF55008	UniParc:UPI00023C14CC	:	:	:

Description

hypothetical protein

Coordinates

chr4:+:308124..309067

Molecular Weight (calculated)

17103.4 Da

IEP (calculated)

9.328

GRAVY (calculated)

-0.551

Length

154 amino acids

Sequence
(BLAST)

001: MGALDHISEL FDCSSGSSKH KKRKQLQTVE VKVKMDCEGC ERKVRKAVEG MKGVNQVDVE RKANKVTVVG YVEASKVVAR IAHRTGKKAE LWPYVPYDVV
101: AHPYAPGVYD KKAPSGYVRN TDDPHYSHLA RASSTEVRYT TAFSDENPSA CVVM

Best Arabidopsis Sequence Match ( AT4G38580.2 )
(BLAST)

001: MGVLDHVSEM FDCSHGHKIK KRKQLQTVEI KVKMDCEGCE RKVRRSVEGM KGVSSVTLEP KAHKVTVVGY VDPNKVVARM SHRTGKKVEL WPYVPYDVVA
101: HPYAAGVYDK KAPSGYVRRV DDPGVSQLAR ASSTEVRYTT AFSDENPAAC VVM

Arabidopsis Description

HIPP26HIPP26 [Source:UniProtKB/TrEMBL;Acc:A0A178V1F5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.