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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • cytosol 3
  • mitochondrion 1
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:nucleus
Any Predictor:cytosol, plastid
MultiLoc:cytosol
Predotar:plastid
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
nucleus: 25951496
gfp PMID: 25951496 doi
X Zhang, H Feng, C Feng, H Xu, X Huang, Q Wang, X Duan, X Wang, G Wei, L Huang, Z Kang
State Key Laboratory of Crop Stress Biology for Arid Areas and College of Life Science, Northwest A&F University, Yangling, Shaanxi, China., State Key Laboratory of Crop Stress Biology for Arid Areas and College of Plant Protection, Northwest A&F University, Yangling, Shaanxi, China.
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS2D01G063000.1 Wheat cytosol, plastid 98.06 98.06
TraesCS2B01G077100.1 Wheat cytosol, plastid 98.06 98.06
Os04t0244800-01 Rice plasma membrane 91.61 91.61
EES11880 Sorghum cytosol 90.32 90.32
Zm00001d004138_P001 Maize cytosol 89.03 89.03
TraesCS6A01G043000.1 Wheat cytosol 76.77 74.84
GSMUA_Achr4P25770_001 Banana cytosol, plastid 72.9 72.9
GSMUA_Achr1P02370_001 Banana cytosol, plastid 70.97 70.97
TraesCS7A01G382700.1 Wheat mitochondrion, plastid 70.32 67.7
Bra009662.1-P Field mustard cytosol 52.26 66.94
AT4G38580.1 Thale cress cytosol 65.81 66.67
KRH60697 Soybean cytosol 65.16 65.58
CDX90282 Canola cytosol 64.52 65.36
Bra033570.1-P Field mustard cytosol 64.52 65.36
Bra010738.1-P Field mustard cytosol 64.52 65.36
CDY65011 Canola cytosol 64.52 65.36
VIT_03s0038g02440.t01 Wine grape cytosol 65.16 65.16
CDY12089 Canola cytosol 63.87 64.71
Solyc01g111600.2.1 Tomato nucleus 63.87 64.71
PGSC0003DMT400015784 Potato cytosol 63.87 64.71
CDX88005 Canola cytosol 60.0 64.14
CDY07874 Canola cytosol 60.0 64.14
KRH29001 Soybean cytosol 64.52 64.1
CDX72748 Canola cytosol 63.23 64.05
VIT_04s0023g03910.t01 Wine grape cytosol 49.03 62.81
AT5G66110.1 Thale cress cytosol 59.35 62.59
CDY52653 Canola cytosol 60.0 60.78
Bra011581.1-P Field mustard cytosol 60.0 60.78
AT4G35060.1 Thale cress cytosol 59.35 60.13
CDX69108 Canola cytosol 59.35 60.13
PGSC0003DMT400009390 Potato cytosol 60.0 58.49
CDY17504 Canola cytosol 58.06 58.44
CDX76309 Canola cytosol 58.06 58.44
Bra034669.1-P Field mustard cytosol 58.06 58.44
Solyc02g083550.1.1 Tomato cytosol 58.06 56.6
VIT_04s0023g03890.t01 Wine grape cytosol 58.06 56.25
TraesCS5A01G191400.1 Wheat cytosol 56.77 55.0
KRH24318 Soybean cytosol, nucleus, plastid 29.68 53.49
TraesCS4A01G211400.1 Wheat mitochondrion, plastid 49.68 52.03
TraesCS3A01G206100.1 Wheat cytosol 48.39 49.67
TraesCS2A01G287200.1 Wheat cytosol 47.74 49.01
TraesCS5A01G244000.1 Wheat cytosol 47.74 48.68
TraesCS2A01G160700.1 Wheat cytosol 49.68 47.53
HORVU2Hr1G011060.1 Barley nucleus, plastid 46.45 46.45
KRH28829 Soybean cytosol 34.84 44.63
TraesCS6A01G259700.1 Wheat mitochondrion 29.68 32.17
TraesCS7A01G345500.1 Wheat cytosol 30.97 29.27
TraesCS5A01G516900.1 Wheat plastid 32.9 26.15
TraesCS1A01G200700.1 Wheat cytosol, plastid 29.03 23.08
Protein Annotations
EnsemblPlants:TraesCS2A01G064900.1EnsemblPlantsGene:TraesCS2A01G064900Gene3D:3.30.70.100GO:GO:0003674GO:GO:0005488GO:GO:0006810
GO:GO:0008150GO:GO:0030001GO:GO:0046872InterPro:HMA_domInterPro:HMA_dom_sfInterPro:IPR006121
PANTHER:PTHR22814PANTHER:PTHR22814:SF168PFAM:PF00403PFscan:PS50846SUPFAM:SSF55008TIGR:cd00371
MapMan:35.1:::::
Description
No Description!
Coordinates
chr2A:+:29261927..29262565
Molecular Weight (calculated)
17292.8 Da
IEP (calculated)
9.914
GRAVY (calculated)
-0.549
Length
155 amino acids
Sequence
(BLAST)
001: MGIVDVVSEY CSLPRGRRHM KKRKQFQTVE MKVRIDCEGC ERKVKKALDD MKGVSSVEVT PKQNKVTVTG YVDPAKVMRR VAYKTGKRVE PWPYVPYDVV
101: AHPYAPGAYD KRAPAGYVRN VMSDPSAAPL ARASSTEARY TAAFSDENPN ACSVM
Best Arabidopsis Sequence Match ( AT4G38580.2 )
(BLAST)
001: MGVLDHVSEM FDCSHGHKIK KRKQLQTVEI KVKMDCEGCE RKVRRSVEGM KGVSSVTLEP KAHKVTVVGY VDPNKVVARM SHRTGKKVEL WPYVPYDVVA
101: HPYAAGVYDK KAPSGYVRRV DDPGVSQLAR ASSTEVRYTT AFSDENPAAC VVM
Arabidopsis Description
HIPP26HIPP26 [Source:UniProtKB/TrEMBL;Acc:A0A178V1F5]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.