Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7D01G333800.1 | Wheat | cytosol | 92.68 | 88.89 |
| TraesCS7B01G237800.1 | Wheat | cytosol | 91.46 | 88.24 |
| HORVU7Hr1G080490.1 | Barley | cytosol | 90.85 | 86.13 |
| Os06t0542300-01 | Rice | cytosol | 70.12 | 62.84 |
| Zm00001d046169_P001 | Maize | cytosol | 63.41 | 57.46 |
| EER89887 | Sorghum | cytosol | 62.8 | 50.99 |
| CDX94648 | Canola | cytosol | 35.98 | 41.84 |
| CDY57455 | Canola | cytosol | 35.98 | 41.84 |
| Bra030119.1-P | Field mustard | cytosol | 35.37 | 41.13 |
| AT1G29100.2 | Thale cress | cytosol | 36.59 | 40.82 |
| TraesCS6A01G259700.1 | Wheat | mitochondrion | 32.32 | 37.06 |
| TraesCS2A01G064900.1 | Wheat | nucleus | 29.27 | 30.97 |
| TraesCS4A01G211400.1 | Wheat | mitochondrion, plastid | 26.22 | 29.05 |
| TraesCS5A01G244000.1 | Wheat | cytosol | 26.83 | 28.95 |
| TraesCS5A01G191400.1 | Wheat | cytosol | 28.05 | 28.75 |
| TraesCS6A01G043000.1 | Wheat | cytosol | 27.44 | 28.3 |
| TraesCS7A01G382700.1 | Wheat | mitochondrion, plastid | 26.83 | 27.33 |
| TraesCS2A01G160700.1 | Wheat | cytosol | 26.83 | 27.16 |
| TraesCS3A01G206100.1 | Wheat | cytosol | 24.39 | 26.49 |
| TraesCS2A01G287200.1 | Wheat | cytosol | 23.17 | 25.17 |
| TraesCS5A01G516900.1 | Wheat | plastid | 29.27 | 24.62 |
| TraesCS1A01G200700.1 | Wheat | cytosol, plastid | 28.66 | 24.1 |
Protein Annotations
| EnsemblPlants:TraesCS7A01G345500.1 | EnsemblPlantsGene:TraesCS7A01G345500 | Gene3D:3.30.70.100 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0006810 |
| GO:GO:0008150 | GO:GO:0030001 | GO:GO:0046872 | InterPro:HMA_dom | InterPro:HMA_dom_sf | InterPro:IPR006121 |
| PANTHER:PTHR22814 | PANTHER:PTHR22814:SF138 | PFAM:PF00403 | PFscan:PS50846 | SEG:seg | SUPFAM:SSF55008 |
| TIGR:cd00371 | MapMan:35.1 | : | : | : | : |
Description
No Description!
Coordinates
chr7A:+:507813707..507814412
Molecular Weight (calculated)
18306.1 Da
IEP (calculated)
7.799
GRAVY (calculated)
-0.700
Length
164 amino acids
Sequence
(BLAST)
(BLAST)
001: MTIVEMQMNI DCDGCEDNVR KALLRLQGVH YVDVDRARDK VTVTGTASQK KVLRAARRTG KLAVLWPSAY DPGYHHAHAY AHAQPAYYHS YQAKPAAAAH
101: AHRYYNSIPH GGYPAPAAQH GSASSYNYHV HGYYDSDLHG YHHEQSNDAR SYFSDDNPTA CSVM
101: AHRYYNSIPH GGYPAPAAQH GSASSYNYHV HGYYDSDLHG YHHEQSNDAR SYFSDDNPTA CSVM
001: MTTIEMRVHM DCVGCESRVK NALQKMRGVD AVEIDMVQQK VTVTGYADQK KVLKKVRKTG RRAELWQLPY NPDHMGGSSS NGGYFYNPQG CNGPINHAAP
101: VPTSSYNYYK HGYDSNDYSS YRHHPVHASI FSHQTGSKFS DENPNACSIM
101: VPTSSYNYYK HGYDSNDYSS YRHHPVHASI FSHQTGSKFS DENPNACSIM
Arabidopsis Description
Heavy metal transport/detoxification superfamily protein [Source:TAIR;Acc:AT1G06330]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.