Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- mitochondrion 4
- plastid 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6D01G240700.1 | Wheat | mitochondrion | 95.1 | 90.67 |
| TraesCS6B01G287000.1 | Wheat | mitochondrion | 93.71 | 88.16 |
| Zm00001d051472_P001 | Maize | mitochondrion | 76.92 | 73.33 |
| OQU85626 | Sorghum | mitochondrion | 76.92 | 66.67 |
| GSMUA_Achr2P10210_001 | Banana | cytosol | 62.94 | 60.81 |
| VIT_08s0040g00130.t01 | Wine grape | cytosol | 48.25 | 55.2 |
| HORVU6Hr1G066220.1 | Barley | cytosol | 71.33 | 55.14 |
| KRH57823 | Soybean | cytosol | 54.55 | 52.7 |
| CDX72102 | Canola | cytosol | 51.05 | 46.2 |
| Bra007280.1-P | Field mustard | cytosol | 50.35 | 45.57 |
| CDY27183 | Canola | cytosol | 50.35 | 45.57 |
| Bra014664.1-P | Field mustard | cytosol | 42.66 | 45.19 |
| CDY47384 | Canola | cytosol, extracellular | 48.25 | 43.4 |
| CDX76017 | Canola | cytosol | 46.85 | 42.41 |
| AT3G56891.1 | Thale cress | cytosol | 48.95 | 42.17 |
| TraesCS7A01G345500.1 | Wheat | cytosol | 37.06 | 32.32 |
| TraesCS3A01G206100.1 | Wheat | cytosol | 33.57 | 31.79 |
| TraesCS4A01G211400.1 | Wheat | mitochondrion, plastid | 32.17 | 31.08 |
| TraesCS5A01G244000.1 | Wheat | cytosol | 32.87 | 30.92 |
| TraesCS2A01G064900.1 | Wheat | nucleus | 32.17 | 29.68 |
| TraesCS5A01G191400.1 | Wheat | cytosol | 32.87 | 29.38 |
| TraesCS2A01G160700.1 | Wheat | cytosol | 32.87 | 29.01 |
| TraesCS6A01G043000.1 | Wheat | cytosol | 32.17 | 28.93 |
| TraesCS5A01G516900.1 | Wheat | plastid | 39.16 | 28.72 |
| TraesCS2A01G287200.1 | Wheat | cytosol | 29.37 | 27.81 |
| TraesCS7A01G382700.1 | Wheat | mitochondrion, plastid | 30.77 | 27.33 |
| TraesCS1A01G200700.1 | Wheat | cytosol, plastid | 36.36 | 26.67 |
Protein Annotations
| EnsemblPlants:TraesCS6A01G259700.1 | EnsemblPlantsGene:TraesCS6A01G259700 | Gene3D:3.30.70.100 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0006810 |
| GO:GO:0008150 | GO:GO:0030001 | GO:GO:0046872 | InterPro:HMA_dom | InterPro:HMA_dom_sf | InterPro:IPR006121 |
| PANTHER:PTHR22814 | PANTHER:PTHR22814:SF85 | PFAM:PF00403 | PFscan:PS50846 | SUPFAM:SSF55008 | TIGR:cd00371 |
| MapMan:35.1 | : | : | : | : | : |
Description
No Description!
Coordinates
chr6A:+:483593595..483594202
Molecular Weight (calculated)
16651.8 Da
IEP (calculated)
6.877
GRAVY (calculated)
-0.376
Length
143 amino acids
Sequence
(BLAST)
(BLAST)
001: MLRFWRTRRS AALSNALSIV EMNVHMDCEG CEKRIRKAMS RLEGVSTVEI DMDTQKVTVT GYVERRRVLR AAEFWPSPYD AGYYPFAIRY LEDDTYLPTH
101: RYHLHGYNDP VVGYYPGHAF THILDDRALA LFNDDNVHAC TVM
101: RYHLHGYNDP VVGYYPGHAF THILDDRALA LFNDDNVHAC TVM
001: MFDWIHGNSR LPIALSIVEL LVDMDCKGCE KKVRRAISKL DGVDTVEIDV DRQKVTVTGY VDREEVLKMV KRTGRTAEYW PFPYNGYYGD YYTYPSQHLE
101: QSDQKIYQTI SYSGKYDFYD VDDFQNTNNS TINGYYPSSS QKVQPNIDEN ALHLFSDDNA HACTIM
101: QSDQKIYQTI SYSGKYDFYD VDDFQNTNNS TINGYYPSSS QKVQPNIDEN ALHLFSDDNA HACTIM
Arabidopsis Description
HIPP45Heavy metal-associated isoprenylated plant protein 45 [Source:UniProtKB/Swiss-Prot;Acc:B3H6D0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.