Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 2
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 2
- golgi 2
- cytosol 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY27183 | Canola | cytosol | 95.57 | 95.57 |
| CDY47384 | Canola | cytosol, extracellular | 85.44 | 84.91 |
| CDX76017 | Canola | cytosol | 84.18 | 84.18 |
| AT3G56891.1 | Thale cress | cytosol | 81.01 | 77.11 |
| VIT_08s0040g00130.t01 | Wine grape | cytosol | 44.3 | 56.0 |
| GSMUA_Achr2P10210_001 | Banana | cytosol | 49.37 | 52.7 |
| KRH57823 | Soybean | cytosol | 49.37 | 52.7 |
| Zm00001d051472_P001 | Maize | mitochondrion | 49.37 | 52.0 |
| TraesCS6D01G240700.1 | Wheat | mitochondrion | 49.37 | 52.0 |
| TraesCS6A01G259700.1 | Wheat | mitochondrion | 46.2 | 51.05 |
| TraesCS6B01G287000.1 | Wheat | mitochondrion | 47.47 | 49.34 |
| OQU85626 | Sorghum | mitochondrion | 49.37 | 47.27 |
| HORVU6Hr1G066220.1 | Barley | cytosol | 44.3 | 37.84 |
| CDY06206 | Canola | cytosol | 34.81 | 36.42 |
| CDX96299 | Canola | cytosol | 34.18 | 36.0 |
| CDX72773 | Canola | cytosol | 34.18 | 36.0 |
| CDY38431 | Canola | cytosol | 32.28 | 34.23 |
| CDY16919 | Canola | cytosol | 32.28 | 34.23 |
| CDY57455 | Canola | cytosol | 30.38 | 34.04 |
| CDX94648 | Canola | cytosol | 30.38 | 34.04 |
| CDY08096 | Canola | cytosol | 29.11 | 33.33 |
| CDY05886 | Canola | cytosol | 29.11 | 33.33 |
| CDX86196 | Canola | cytosol | 32.91 | 32.91 |
| CDY42647 | Canola | cytosol | 32.91 | 32.91 |
| CDY41999 | Canola | cytosol | 32.91 | 32.91 |
| CDX85452 | Canola | cytosol | 31.01 | 32.89 |
| CDY55938 | Canola | cytosol | 31.01 | 32.89 |
| CDY07874 | Canola | cytosol | 29.75 | 32.41 |
| CDX88005 | Canola | cytosol | 29.75 | 32.41 |
| CDY65011 | Canola | cytosol | 30.38 | 31.37 |
| CDY12499 | Canola | cytosol | 30.38 | 31.37 |
| CDY25762 | Canola | cytosol | 30.38 | 31.37 |
| CDX72748 | Canola | cytosol | 30.38 | 31.37 |
| CDX90282 | Canola | cytosol | 30.38 | 31.37 |
| CDY12089 | Canola | cytosol | 30.38 | 31.37 |
| CDX99542 | Canola | plastid | 36.08 | 31.32 |
| CDX86861 | Canola | plastid | 36.08 | 31.32 |
| CDX75144 | Canola | cytosol | 24.68 | 30.95 |
| CDY13354 | Canola | cytosol | 34.81 | 30.9 |
| CDX67533 | Canola | cytosol | 34.81 | 30.9 |
| CDY52653 | Canola | cytosol | 29.75 | 30.72 |
| CDY04750 | Canola | cytosol | 29.75 | 30.72 |
| CDY21408 | Canola | cytosol | 29.75 | 30.72 |
| CDX69108 | Canola | cytosol | 29.75 | 30.72 |
| CDY17504 | Canola | cytosol | 29.11 | 29.87 |
| CDX76309 | Canola | cytosol | 29.11 | 29.87 |
| CDX85985 | Canola | mitochondrion | 22.15 | 29.17 |
| CDY36193 | Canola | cytosol | 25.95 | 27.33 |
| CDY09978 | Canola | cytosol | 36.71 | 19.86 |
Protein Annotations
| Gene3D:3.30.70.100 | MapMan:35.1 | GO:A0A078C5C2 | EnsemblPlants:CDX72102 | ProteinID:CDX72102 | ProteinID:CDX72102.1 |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0030001 | GO:GO:0046872 |
| EnsemblPlantsGene:GSBRNA2T00155904001 | InterPro:HMA_dom | InterPro:HMA_dom_sf | InterPro:Heavy-metal-associated_CS | InterPro:IPR006121 | PFAM:PF00403 |
| ScanProsite:PS01047 | PFscan:PS50846 | PANTHER:PTHR22814 | PANTHER:PTHR22814:SF85 | SUPFAM:SSF55008 | SignalP:SignalP-noTM |
| UniParc:UPI0004EB5D6D | SEG:seg | : | : | : | : |
Description
BnaC08g27720D
Coordinates
chrLK031795:+:2397111..2397964
Molecular Weight (calculated)
18204.3 Da
IEP (calculated)
4.812
GRAVY (calculated)
-0.556
Length
158 amino acids
Sequence
(BLAST)
(BLAST)
001: MLDWIHGNSR LPLALSVVEL LVDMDCQGCE KKVRRAISKL DGVDTVEIDV DQQKVTVTGY VDREDVLRMV KRTGRAAEFW PFPYNGYYGD YYTYPSQYLE
101: QPIQKINHAE NTISYNGKHD FYDDSSITGY NYPRPPQKVD ENALHLFSDD NVHACAVM
101: QPIQKINHAE NTISYNGKHD FYDDSSITGY NYPRPPQKVD ENALHLFSDD NVHACAVM
001: MFDWIHGNSR LPIALSIVEL LVDMDCKGCE KKVRRAISKL DGVDTVEIDV DRQKVTVTGY VDREEVLKMV KRTGRTAEYW PFPYNGYYGD YYTYPSQHLE
101: QSDQKIYQTI SYSGKYDFYD VDDFQNTNNS TINGYYPSSS QKVQPNIDEN ALHLFSDDNA HACTIM
101: QSDQKIYQTI SYSGKYDFYD VDDFQNTNNS TINGYYPSSS QKVQPNIDEN ALHLFSDDNA HACTIM
Arabidopsis Description
HIPP45Heavy metal-associated isoprenylated plant protein 45 [Source:UniProtKB/Swiss-Prot;Acc:B3H6D0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.