Factsheet for VIT_08s0040g00130.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH57823	Soybean	cytosol	74.4	62.84
GSMUA_Achr2P10210_001	Banana	cytosol	68.8	58.11
Bra014664.1-P	Field mustard	cytosol	56.0	51.85
TraesCS6D01G240700.1	Wheat	mitochondrion	60.0	50.0
TraesCS6A01G259700.1	Wheat	mitochondrion	55.2	48.25
Zm00001d051472_P001	Maize	mitochondrion	57.6	48.0
VIT_10s0003g01220.t01	Wine grape	cytosol	54.4	46.9
TraesCS6B01G287000.1	Wheat	mitochondrion	56.8	46.71
CDY47384	Canola	cytosol, extracellular	56.8	44.65
CDX72102	Canola	cytosol	56.0	44.3
OQU85626	Sorghum	mitochondrion	58.4	44.24
CDY27183	Canola	cytosol	55.2	43.67
CDX76017	Canola	cytosol	55.2	43.67
Bra007280.1-P	Field mustard	cytosol	55.2	43.67
VIT_12s0028g02190.t01	Wine grape	cytosol	50.4	43.15
AT3G56891.1	Thale cress	cytosol	56.0	42.17
VIT_02s0025g03010.t01	Wine grape	cytosol, mitochondrion	46.4	40.85
VIT_04s0023g03910.t01	Wine grape	cytosol	36.0	37.19
HORVU6Hr1G066220.1	Barley	cytosol	52.8	35.68
VIT_01s0011g04700.t01	Wine grape	cytosol	40.0	34.01
VIT_07s0031g01160.t01	Wine grape	cytosol	40.0	33.11
VIT_14s0006g01800.t01	Wine grape	cytosol	37.6	32.19
VIT_03s0038g02440.t01	Wine grape	cytosol	39.2	31.61
VIT_18s0001g04800.t01	Wine grape	cytosol, plastid	36.8	30.87
VIT_16s0050g00150.t01	Wine grape	mitochondrion, plastid	37.6	27.33
VIT_04s0023g03890.t01	Wine grape	cytosol	34.4	26.88

Protein Annotations

EntrezGene:100248113	wikigene:100248113	Gene3D:3.30.70.100	MapMan:35.1	EMBL:AM477006	ProteinID:CAN70758
ProteinID:CAN70758.1	ProteinID:CCB57169	ProteinID:CCB57169.1	UniProt:F6HQT8	EMBL:FN596008	GO:GO:0003674
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006810
GO:GO:0008150	GO:GO:0009987	GO:GO:0019725	GO:GO:0030001	GO:GO:0046872	GO:GO:0046914
GO:GO:0046916	InterPro:HMA_dom	InterPro:HMA_dom_sf	InterPro:IPR006121	EntrezGene:LOC100248113	wikigene:LOC100248113
PFAM:PF00403	PFscan:PS50846	PANTHER:PTHR22814	PANTHER:PTHR22814:SF85	SUPFAM:SSF55008	UniParc:UPI00021082C9
ArrayExpress:VIT_08s0040g00130	EnsemblPlantsGene:VIT_08s0040g00130	EnsemblPlants:VIT_08s0040g00130.t01	RefSeq:XP_002262627	RefSeq:XP_002262627.1	:

Description

No Description!

Coordinates

chr8:-:11072166..11072771

Molecular Weight (calculated)

14656.1 Da

IEP (calculated)

5.148

GRAVY (calculated)

-0.695

Length

125 amino acids

Sequence
(BLAST)

001: MDCEGCEKRI RRAISKLSGV DHLDIDMDKQ KVTVTGYVDQ RQVLKVVRRT GRKAEFWPYP YDSEYYPYAA QYLDESTYTS SYNYYMHGYN ESVHGYFPDP
101: PYPILIDDQT AHIFSDDNVH ACSIM

Best Arabidopsis Sequence Match ( AT3G56891.2 )
(BLAST)

001: MDCKGCEKKV RRAISKLDGV DTVEIDVDRQ KVTVTGYVDR EEVLKMVKRT GRTAEYWPFP YNGYYGDYYT YPSQHLEQSD QKIYQTISYS GKYDFYDVDD
101: FQNTNNSTIN GYYPSSSQKV QPNIDENALH LFSDDNAHAC TIM

Arabidopsis Description

HIPP45Heavy metal-associated isoprenylated plant protein 45 [Source:UniProtKB/Swiss-Prot;Acc:B3H6D0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.