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Wine grape
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion, cytosol

Predictor Summary:
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 1
  • golgi 1
  • plastid 1
  • mitochondrion 3
  • nucleus 1
  • cytosol 2
PPI

Inferred distinct locusB in Crop

locusBlocations
VIT_01s0026g02460.t01

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT2G18196.1 VIT_01s0026g02460.t01 AT5G15210.1 18974936
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400079287 Potato cytosol 57.04 83.51
GSMUA_Achr11P... Banana cytosol 69.01 74.24
Solyc08g075880.2.1 Tomato endoplasmic reticulum, plastid 81.69 64.8
KRG92555 Soybean cytosol 80.99 64.61
KRH34236 Soybean cytosol 80.28 64.04
PGSC0003DMT400079324 Potato endoplasmic reticulum 80.99 63.89
Bra028528.1-P Field mustard cytosol 77.46 61.8
CDX67533 Canola cytosol 77.46 61.8
CDY13354 Canola cytosol 77.46 61.8
AT2G18196.1 Thale cress plastid 76.76 61.24
AT4G10465.1 Thale cress plastid 75.35 58.47
CDX99542 Canola plastid 73.94 57.69
Bra037919.1-P Field mustard plastid 73.94 57.69
CDX86861 Canola plastid 73.94 57.69
GSMUA_Achr11P... Banana cytosol 74.65 57.3
CDX85985 Canola mitochondrion 47.18 55.83
GSMUA_Achr2P10220_001 Banana mitochondrion, plastid 73.24 54.45
GSMUA_Achr1P00790_001 Banana cytosol 73.24 53.06
Os03t0120400-01 Rice plastid 70.42 51.81
EER92967 Sorghum plastid 69.72 51.03
Zm00001d027405_P001 Maize plastid 68.31 50.0
TraesCS4B01G348900.1 Wheat plastid 68.31 49.74
TraesCS4D01G343300.1 Wheat plastid 68.31 49.74
TraesCS5A01G516900.1 Wheat plastid 68.31 49.74
Os10t0537400-00 Rice cytosol 62.68 48.11
VIT_08s0040g00130.t01 Wine grape cytosol 40.85 46.4
VIT_14s0006g01800.t01 Wine grape cytosol 43.66 42.47
TraesCS1B01G215100.1 Wheat cytosol, plastid 57.04 41.12
TraesCS1D01G204100.1 Wheat cytosol, plastid 57.04 41.12
TraesCS1A01G200700.1 Wheat cytosol, plastid 56.34 41.03
VIT_10s0003g01220.t01 Wine grape cytosol 40.85 40.0
KXG39011 Sorghum cytosol 58.45 39.9
VIT_01s0011g04700.t01 Wine grape cytosol 39.44 38.1
VIT_12s0028g02190.t01 Wine grape cytosol 38.73 37.67
VIT_07s0031g01160.t01 Wine grape cytosol 38.73 36.42
VIT_18s0001g04800.t01 Wine grape cytosol, plastid 38.03 36.24
VIT_04s0023g03910.t01 Wine grape cytosol 28.87 33.88
HORVU4Hr1G085090.2 Barley plastid 67.61 33.57
VIT_03s0038g02440.t01 Wine grape cytosol 33.8 30.97
VIT_04s0023g03890.t01 Wine grape cytosol 34.51 30.62
VIT_16s0050g00150.t01 Wine grape mitochondrion, plastid 36.62 30.23
Protein Annotations
EntrezGene:100261608wikigene:100261608Gene3D:3.30.70.100MapMan:35.1UniProt:A5APE7EMBL:AM431416
ProteinID:CAN73635ProteinID:CAN73635.1ProteinID:CBI34626ProteinID:CBI34626.3EMBL:FN596251GO:GO:0003674
GO:GO:0005488GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0006810
GO:GO:0008150GO:GO:0009987GO:GO:0019725GO:GO:0030001GO:GO:0046872GO:GO:0046914
GO:GO:0046916InterPro:HMA_domInterPro:HMA_dom_sfInterPro:IPR006121EntrezGene:LOC100261608wikigene:LOC100261608
PFAM:PF00403PFscan:PS50846PANTHER:PTHR22814PANTHER:PTHR22814:SF280SUPFAM:SSF55008TIGR:TC64668
UniParc:UPI000151F405ArrayExpress:VIT_02s0025g03010EnsemblPlantsGene:VIT_02s0025g03010EnsemblPlants:VIT_02s0025g03010.t01unigene:Vvi.3715RefSeq:XP_002277877
RefSeq:XP_002277877.2:::::
Description
No Description!
Coordinates
chr2:-:2559773..2561348
Molecular Weight (calculated)
16362.5 Da
IEP (calculated)
8.700
GRAVY (calculated)
-0.614
Length
142 amino acids
Sequence
(BLAST)
001: MPKGRPLSLQ TVELKVRMCC TGCERVVKNA IFKLRGVDSV EVDLGMEKVT VVGYVDRNKV LKAVRRSGKR AEFWPYPDPP LYFTSSNDYF KDLTNDYKES
101: YNYWRHGYNV ADRHGTIPPT HRGDDKVSNM FNDDNVNACC LM
Best Arabidopsis Sequence Match ( AT2G18196.1 )
(BLAST)
001: MGFGSFISTI TYCLFFRYPH KKPKFKSVSH LNHYHTMPMA RPLSLQTIDL KVRMCCSGCE RVVKHAIYKL RGVDSVEVNL EMERVTVVGY VERKKVLKAV
101: RRAGKRAEFW PYPDMPRYFT SSDHYFKDTT REFRESYNYY RHGYNLSDRH GNIHVTNRGD DKMSNFFNDD NVHACSLM
Arabidopsis Description
HIPP30Heavy metal-associated isoprenylated plant protein 30 [Source:UniProtKB/Swiss-Prot;Acc:F4IQG4]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.