Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| GSMUA_Achr10P... | |
| GSMUA_Achr6P02700_001 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT2G18196.1 | GSMUA_Achr10P... | AT5G15210.1 | 18974936 |
| AT2G18196.1 | GSMUA_Achr6P02700_001 | AT5G15210.1 | 18974936 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400079287 | Potato | cytosol | 51.52 | 70.1 |
| VIT_02s0025g03010.t01 | Wine grape | cytosol, mitochondrion | 74.24 | 69.01 |
| GSMUA_Achr11P... | Banana | cytosol | 91.67 | 65.41 |
| GSMUA_Achr2P10220_001 | Banana | mitochondrion, plastid | 85.61 | 59.16 |
| GSMUA_Achr1P00790_001 | Banana | cytosol | 87.12 | 58.67 |
| Os03t0120400-01 | Rice | plastid | 82.58 | 56.48 |
| TraesCS4B01G348900.1 | Wheat | plastid | 81.82 | 55.38 |
| TraesCS5A01G516900.1 | Wheat | plastid | 81.82 | 55.38 |
| TraesCS4D01G343300.1 | Wheat | plastid | 81.82 | 55.38 |
| Zm00001d027405_P001 | Maize | plastid | 81.06 | 55.15 |
| EER92967 | Sorghum | plastid | 81.06 | 55.15 |
| KRH34236 | Soybean | cytosol | 71.21 | 52.81 |
| PGSC0003DMT400079324 | Potato | endoplasmic reticulum | 71.97 | 52.78 |
| Solyc08g075880.2.1 | Tomato | endoplasmic reticulum, plastid | 71.21 | 52.51 |
| KRG92555 | Soybean | cytosol | 68.94 | 51.12 |
| CDX85985 | Canola | mitochondrion | 46.21 | 50.83 |
| PGSC0003DMT400012844 | Potato | plastid | 70.45 | 50.54 |
| CDY13354 | Canola | cytosol | 67.42 | 50.0 |
| CDX67533 | Canola | cytosol | 67.42 | 50.0 |
| Bra028528.1-P | Field mustard | cytosol | 67.42 | 50.0 |
| AT2G18196.1 | Thale cress | plastid | 66.67 | 49.44 |
| CDX99542 | Canola | plastid | 66.67 | 48.35 |
| CDX86861 | Canola | plastid | 66.67 | 48.35 |
| Os10t0537400-00 | Rice | cytosol | 67.42 | 48.11 |
| AT4G10465.1 | Thale cress | plastid | 66.67 | 48.09 |
| Bra037919.1-P | Field mustard | plastid | 65.91 | 47.8 |
| TraesCS1B01G215100.1 | Wheat | cytosol, plastid | 62.88 | 42.13 |
| TraesCS1A01G200700.1 | Wheat | cytosol, plastid | 62.12 | 42.05 |
| GSMUA_Achr2P10210_001 | Banana | cytosol | 46.97 | 41.89 |
| KXG39011 | Sorghum | cytosol | 65.91 | 41.83 |
| TraesCS1D01G204100.1 | Wheat | cytosol, plastid | 62.12 | 41.62 |
| GSMUA_Achr10P... | Banana | cytosol | 41.67 | 39.01 |
| GSMUA_Achr3P15460_001 | Banana | cytosol | 40.15 | 38.69 |
| HORVU4Hr1G085090.2 | Barley | plastid | 81.82 | 37.76 |
| GSMUA_Achr7P13900_001 | Banana | cytosol | 41.67 | 37.41 |
| GSMUA_Achr3P04460_001 | Banana | cytosol | 39.39 | 34.9 |
| GSMUA_Achr4P01830_001 | Banana | cytosol | 39.39 | 34.9 |
| GSMUA_Achr6P14470_001 | Banana | cytosol | 37.88 | 34.72 |
| GSMUA_Achr10P... | Banana | cytosol | 37.88 | 34.25 |
| GSMUA_Achr7P11680_001 | Banana | cytosol | 38.64 | 34.23 |
| GSMUA_Achr3P07890_001 | Banana | cytosol, mitochondrion, plastid | 37.88 | 33.56 |
| GSMUA_Achr4P25770_001 | Banana | cytosol, plastid | 37.88 | 32.26 |
| GSMUA_Achr1P02370_001 | Banana | cytosol, plastid | 37.12 | 31.61 |
| GSMUA_Achr3P27280_001 | Banana | cytosol | 32.58 | 31.16 |
| GSMUA_Achr2P07910_001 | Banana | cytosol | 34.85 | 30.46 |
| GSMUA_Achr1P12840_001 | Banana | cytosol | 33.33 | 29.14 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr11P02710_001 | EnsemblPlants:GSMUA_Achr11T02710_001 | EnsemblPlantsGene:GSMUA_Achr11G02710_001 | Gene3D:3.30.70.100 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0006810 | GO:GO:0008150 | GO:GO:0030001 | GO:GO:0046872 | InterPro:HMA_dom | InterPro:HMA_dom_sf |
| InterPro:IPR006121 | PANTHER:PTHR22814 | PANTHER:PTHR22814:SF280 | PFAM:PF00403 | PFscan:PS50846 | SUPFAM:SSF55008 |
| UniParc:UPI000295BE4C | UniProt:M0RNV1 | MapMan:35.1 | : | : | : |
Description
Putative Copper transport protein ATOX1 homolog [Source:GMGC_GENE;Acc:GSMUA_Achr11G02710_001]
Coordinates
chr11:-:1884398..1885372
Molecular Weight (calculated)
15261.1 Da
IEP (calculated)
6.508
GRAVY (calculated)
-0.626
Length
132 amino acids
Sequence
(BLAST)
(BLAST)
001: MITVELKVRM CCTGCERVVK QALLKLRGVD SVEVDLELEK VTVTGYVDRN KVLKEVRRSG KKAEFWPNPD LPLHFTTAKD YFHDEESFRD SYNYWRHGYN
101: GDKHGRLPVT QRGEDAVSNM FNDDDVNACS VM
101: GDKHGRLPVT QRGEDAVSNM FNDDDVNACS VM
001: MGFGSFISTI TYCLFFRYPH KKPKFKSVSH LNHYHTMPMA RPLSLQTIDL KVRMCCSGCE RVVKHAIYKL RGVDSVEVNL EMERVTVVGY VERKKVLKAV
101: RRAGKRAEFW PYPDMPRYFT SSDHYFKDTT REFRESYNYY RHGYNLSDRH GNIHVTNRGD DKMSNFFNDD NVHACSLM
101: RRAGKRAEFW PYPDMPRYFT SSDHYFKDTT REFRESYNYY RHGYNLSDRH GNIHVTNRGD DKMSNFFNDD NVHACSLM
Arabidopsis Description
HIPP30Heavy metal-associated isoprenylated plant protein 30 [Source:UniProtKB/Swiss-Prot;Acc:F4IQG4]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.